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Genome analysis

Integrative transcriptomics identifies an 18-gene candidate blood-accessible biomarker panel for longitudinal monitoring of spaceflight-induced muscle atrophy

Jae Ho Shim, Ji Yeon Lee, Jihye Han, Hyeon Soo Kim

Shenling Qige Granules inhibit esophageal squamous cell carcinoma progression in TE-1 xenograft and cell-based models by modulating the DCN–TGF-β/Smad signaling axis

Zihui Liu, Yiting Gu, [ ... ], Zhihua Du

Integrated multi-omic analysis characterizes an IFNγ-responsive-to-myeloid-suppressive immune continuum in immune-active hepatocellular carcinoma

Luping Lin, Ningna Weng, [ ... ], Xiao Chen

GP-DHT: A dual-head transformer with supervised contrastive learning for shared-gene pretraining and single-cell GRN prediction

Shuai Yan, Qingzhi Yu, Wenfeng Dai, Xiang Cheng

Multi-locus genome-wide association analysis of grain yield, plant height, panicle length, and flowering time in the Senegalese pearl millet [Pennisetum glaucum (L.) R. Br.] germplasm

Aliou Ba, Oumar Diack, [ ... ], Phinehas Tukamuhabwa

Rigorous validation of graph-based network analysis reappraises biologically coherent ADHD-associated transcriptomic modules in peripheral blood

Nehal M. Ali

Codon-aware multi-scale feature fusion for metagenomic sequence classification

Yan Qian, Quanjie Song, Xinyi Xie, Li Deng

Characterization of the dual functions of Leishmania CK1.2 in both the parasite and the macrophage

Daniel Martel, Olivier Leclercq, [ ... ], Najma Rachidi

Sub-consensus haploid variant calling in long-read sequencing technology

Xavier Zair, Andreas Wilm, [ ... ], Swapnil Mishra

Multi-omics integration reveals tissue-specific biosynthesis of sesquiterpenoids in the medicinal plant Eupatorium lindleyanum

Yingzhe Wang, Pan Jiang, [ ... ], Kun Guo

Genome‑wide identification of the NHX gene family in Forsythia identifies FsNHX3 and FsNHX6 as potential candidates involved in abiotic stress responses

Lulu Li, Xiaojun Ma, [ ... ], Xinhong Wang

An epithelial–mesenchymal transition-like synovial stromal-remodeling programme associated with knee osteoarthritis pain: Exploratory transcriptomic discovery and spatial analysis

Diovanni de Paula Ferreira, Rafael de Negreiros Botan, Wagner R. Martins, Iruena M. Kessler

Genome wide identification and analysis of inositol tetrakisphosphate kinase (ITPK) gene family in Triticum aestivum L.

Fatima Umar, Rizwana Maqbool, Muhammad Ahsan Khan, Bushra Sadia

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