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Genomics

Protocol: A multi-factorial, multi-centre study, for biomarker identification in healthy controls for comparison to babies with moderate-severe NESHIE

Carina C. Babbo, Jeanne van Rensburg, [ ... ], Michael S. Pepper

FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization

Afnan Faridoun, Ramon Carvalho, [ ... ], Khaled Altabtbaei

Leveraging a synthetic biology approach to enhance BCG-mediated expansion of Vγ9Vδ2 T cells

Christine M. Qabar, Allison W. Roberts, [ ... ], Jeffery S. Cox

A genomic locus uniquely encoded by blueberry-infecting Xylella fastidiosa strains affects motility and biofilm formation in vitro, and virulence in planta

Navdeep Kaur, Marcus V. Merfa, [ ... ], Leonardo De La Fuente

Clonal spread of multidrug-resistant Salmonella Kentucky ST198 in poultry market environments in Dhaka city, Bangladesh

Md Abu Sayem Khan, Mahbub Arefin Rafi, [ ... ], Sabita Rezwana Rahman

GermVarX: A Robust Workflow for Joint Germline Variant Exploration in whole-exome sequencing cohorts

Thao Thi Phuong Nguyen, Dung Duc Nguyen, [ ... ], Trang Thi Ha Tran

Analysis of morphological, morphokinetics, cell-free DNA, microRNAs parameters to predict aneuploidy status of embryos

Achmad Kemal Harzif, Intan Indah Permatasari, [ ... ], Budi Wiweko

Hepatic transcriptomic responses in gravid and non-gravid rats exposed to HFPO-DA: Analyses to inform the role of maternal effects in neonatal toxicity

Melissa M. Heintz, Chad M. Thompson, [ ... ], Laurie C. Haws

Integrated transcriptome and single-cell sequencing analysis identify blood-pancreas shared lncRNA biomarkers in new-onset T2DM

Yan Wang, Yangming Qu, [ ... ], Yan Yao

Chloroplast genome assembly, annotation, comparative genomics, and genetic diversity analysis of a vulnerable endemic species Lavandula maroccana Murb

Manosh Kumar Biswas, Jean Legeay, [ ... ], Bulbul Ahmed

Transcriptional regulation in skeletal muscle and adipose tissue of lean and obese colony cats

Rahel Rigotti, Annette Liesegang, [ ... ], Brigitta Wichert

Genetic variations associated with immediate hypersensitivity reactions to iodinated contrast media: A whole exome sequencing study

Noeul Kang, Hoshik Kwon, [ ... ], Ho Yun Lee

Comparative fecal microbiome analysis of the endangered Volcano rabbit (Romerolagus diazi) reveals a microbial core in contrasting habitats of Central Mexico

Leslie M. Montes-Carreto, Hanya D. Arellano-Hernández, José Antonio Guerrero, Esperanza Martinez-Romero

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