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Genome analysis

UBE2S emerges as a key driver in an NK cell–based prognostic model for clear cell renal cell carcinoma

Kang Leng, Yiheng Zhou, [ ... ], Hua Song

Analyzing the performance of deep learning splice prediction algorithms

Nathan Fortier, Gabe Rudy, Andreas Scherer

Integrative bioinformatic analysis prioritizes TIMP1 and FN1 as angiogenesis-related candidate genes in diabetic foot ulcers

Xiangjun Hu, Degang Dong, [ ... ], Zhangren Yan

Both conventionally and organically fertilized tomatoes maintain fruit quality through uncontrolled green peach aphid infestation, with a transcriptional shift towards catabolism

June Labbancz, Luke Gustafson, Preston Andrews, Amit Dhingra

Multi-Omics and network-based exploration of potential molecular pathways in heart failure relevant to left bundle branch pacing response heterogeneity: Immune remodeling, hub gene identification, and drug repurposing hypotheses

Xia Sun, Xiang Tang, [ ... ], Mingfeng Jin

Variants in the DNAH11 gene responsible for primary ciliary dyskinesia or probably atypical primary ciliary dyskinesia presenting left-right asymmetry disorder

Kai Zhao, Lamei Yuan, [ ... ], Hao Deng

A snapshot of HIV-1 genetic diversity in Dominican Republic in 2024: Predominance of the B_Car lineage and first description of a CRF02-AG isolate

Lily Soto, Yoneira F. Sulbaran, [ ... ], Flor H. Pujol

The wild, wild west of plasmids: First insights into comparative genomics of Borrelia burgdorferi sensu lato

Sabrina Hepner, Robert E. Rollins, [ ... ], Gabriele Margos

Identification and functional analysis of key miRNAs and target genes associated with failure of HBV mother-to-child transmission prevention

Quan He, Xiong Zou, [ ... ], Hai Li

Complete genome and functional insights into Microbacterium sp. strain FBCC-B4120, a novel freshwater isolate with diverse biotechnological traits

Jina Kim, Hyaekang Kim, [ ... ], Woori Kwak

Genetic variants and polygenic risk scores associated with paroxysmal atrial fibrillation in the Japanese population

Megumi Shiomi, Yuki Nagata, [ ... ], Toshihiro Tanaka

Quantitative proteomic analysis of longissimus dorsi muscle in Chinese and Western pigs using DIA mass spectrometry with PRM validation

Hanyu Cao, Xiaojin Li, [ ... ], Shenghe Li

Single-cell transcriptomics of bronchoalveolar lavage reveals divergent macrophage subpopulations and trajectories in interstitial lung disease

Lai-Ying Zhang, Peter C. Allen, [ ... ], Brendan J. O’Sullivan

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