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Genomics

Stalking the Fourth Domain in Metagenomic Data: Searching for, Discovering, and Interpreting Novel, Deep Branches in Marker Gene Phylogenetic Trees

Dongying Wu, Martin Wu, [ ... ], Jonathan A. Eisen

Examining Sources of Error in PCR by Single-Molecule Sequencing

Vladimir Potapov, Jennifer L. Ong

A Metagenomic Approach to Characterization of the Vaginal Microbiome Signature in Pregnancy

Kjersti Aagaard, Kevin Riehle, [ ... ], James Versalovic

Genetic Structure of Europeans: A View from the North–East

Mari Nelis, Tõnu Esko, [ ... ], Andres Metspalu

Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics

Ian Holmes, Keith Harris, Christopher Quince

Strengths and Limitations of 16S rRNA Gene Amplicon Sequencing in Revealing Temporal Microbial Community Dynamics

Rachel Poretsky, Luis M. Rodriguez-R, [ ... ], Konstantinos T. Konstantinidis

Comparing and Evaluating Metagenome Assembly Tools from a Microbiologist’s Perspective - Not Only Size Matters!

John Vollmers, Sandra Wiegand, Anne-Kristin Kaster

Construction of an infectious horsepox virus vaccine from chemically synthesized DNA fragments

Ryan S. Noyce, Seth Lederman, David H. Evans

Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

Christian Hoffmann, Serena Dollive, [ ... ], Frederic D. Bushman

Single-nucleus and single-cell transcriptomes compared in matched cortical cell types

Trygve E. Bakken, Rebecca D. Hodge, [ ... ], Bosiljka Tasic

Baseline human gut microbiota profile in healthy people and standard reporting template

Charles H. King, Hiral Desai, [ ... ], Raja Mazumder

Analytical and Clinical Validation of a Digital Sequencing Panel for Quantitative, Highly Accurate Evaluation of Cell-Free Circulating Tumor DNA

Richard B. Lanman, Stefanie A. Mortimer, [ ... ], AmirAli Talasaz

Gut microbiome diversity is associated with sleep physiology in humans

Robert P. Smith, Cole Easson, [ ... ], Jaime L. Tartar

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