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Metagenomics

Study protocol on antimicrobial resistance burden, transmission dynamics, and therapeutic bacteriophages in livestock and exposed farming populations in Nagpur, India: An integrated One Health approach

Amit R. Nayak, Jayshree Shukla, [ ... ], Rajpal Singh Kashyap

RNA metagenomic profiling of mosquito viromes associated with Vector-Borne diseases in Quebec, Canada

Ines Levade, Benjamin Delisle, Éric Fournier, Christian Therrien

ViralMultiNet: A structure-aware multimodal framework for viral protein function prediction in wastewater surveillance

FuGuo Liu, TingLian Lai, WenXia Xu, GuoDong Li

Histological and metagenomic analysis of microbial communities in archaeological human bones

Damla Kaptan, Anne Cecilie Flemming Elvers, [ ... ], Hege Ingjerd Hollund

Metagenomic and taxonomic profiling of phyllosphere bacteria from Mangifera indica in response to urban air pollutants in Medellín, Colombia

Natalia Bernal Hernández, Héctor Alejandro Rodríguez Cabal, [ ... ], Luisa María Múnera Porras

Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies

Bianca-Maria Cosma, Stephanie Pillay, David Calderón-Franco, Thomas Abeel

Molecular identification and microbiome profiling of household casebearer, Phereoeca sp. (Lepidoptera: Tineidae) from Malaysia: Potential implications for human skin irritation

Salmah Yaakop, Muhammad Afiq Senen, Nur Alya Adila Rosli, Muhamad Azmi Mohammed

Comparative fecal microbiome analysis of the endangered Volcano rabbit (Romerolagus diazi) reveals a microbial core in contrasting habitats of Central Mexico

Leslie M. Montes-Carreto, Hanya D. Arellano-Hernández, José Antonio Guerrero, Esperanza Martinez-Romero

New insights into the feeding behaviour of the Japanese squid Todarodes pacificus paralarvae, and a combined analysis of metagenome and amino acid isotope ratios

Kohsuke Adachi, Yoshito Chikaraishi, [ ... ], Jun Yamamoto

Colorectal adenoma presence is associated with decreased menaquinone pathway functions in the gut microbiome of patients undergoing routine colonoscopy

Ilona Vilkoite, Ivars Silamiķelis, [ ... ], Laila Silamiķele

Shotgun metagenomic profiling reveals Bacillus-dominated bacterial communities in urban rooftop and surface garden soils of Bangladesh

M. Nazmul Hoque, Md. Liton Rana, [ ... ], Md. Tanvir Rahman

Development of a multiplex ddPCR assay for simultaneous absolute quantification of bacterial, fungal, and human DNA

Guohong Huang, Torrey L. Gallagher, Gregory J. Tsongalis, Joel A. Lefferts

Uncovering the hidden yeast diversity in fermented coffee: Insights from a shotgun metagenomic approach

Katherine Bedoya-Urrego, Aida Esther Peñuela-Martínez, Juan F. Alzate

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