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Genome analysis

Modeling Transcriptome Based on Transcript-Sampling Data

Jiang Zhu, Fuhong He, Jing Wang, Jun Yu

A New Perspective on Transcriptional System Regulation (TSR): Towards TSR Profiling

Rudolf S. N. Fehrmann, Hendrik J. M. de Jonge, [ ... ], Eveline S. J. M. de Bont

Cross-Species Functionality of Pararetroviral Elements Driving Ribosome Shunting

Mikhail M. Pooggin, Johannes Fütterer, Thomas Hohn

Asap: A Framework for Over-Representation Statistics for Transcription Factor Binding Sites

Troels T. Marstrand, Jes Frellsen, [ ... ], Anders Krogh

Alternative mRNA Editing in Trypanosomes Is Extensive and May Contribute to Mitochondrial Protein Diversity

Torsten Ochsenreiter, Michael Cipriano, Stephen L. Hajduk

Predicted Functional RNAs within Coding Regions Constrain Evolutionary Rates of Yeast Proteins

Charles D. Warden, Seong-Ho Kim, Soojin V. Yi

Protein Function Assignment through Mining Cross-Species Protein-Protein Interactions

Xue-wen Chen, Mei Liu, Robert Ward

Comparative Bacterial Proteomics: Analysis of the Core Genome Concept

Stephen J. Callister, Lee Ann McCue, [ ... ], Mary S. Lipton

A Biomedically Enriched Collection of 7000 Human ORF Clones

Andreas Rolfs, Yanhui Hu, [ ... ], Joshua LaBaer

Human and Chimpanzee Gene Expression Differences Replicated in Mice Fed Different Diets

Mehmet Somel, Hilliary Creely, [ ... ], Svante Pääbo

Genome-Wide Survey and Developmental Expression Mapping of Zebrafish SET Domain-Containing Genes

Xiao-Jian Sun, Peng-Fei Xu, [ ... ], Zhu Chen

Gene Characterization Index: Assessing the Depth of Gene Annotation

Danielle Kemmer, Raf M. Podowski, [ ... ], Wyeth W. Wasserman

Beyond Parkinson Disease: Amyotrophic Lateral Sclerosis and the Axon Guidance Pathway

Timothy G. Lesnick, Eric J. Sorenson, [ ... ], Demetrius M. Maraganore

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