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Genome analysis

Updated Three-Stage Model for the Peopling of the Americas

Connie J. Mulligan, Andrew Kitchen, Michael M. Miyamoto

published 17 Sep 2008

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The Evolving Transcriptome of Head and Neck Squamous Cell Carcinoma: A Systematic Review

Yau-Hua Yu, Hsu-Ko Kuo, Kuo-Wei Chang

published 15 Sep 2008

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A Seriation Approach for Visualization-Driven Discovery of Co-Expression Patterns in Serial Analysis of Gene Expression (SAGE) Data

Olena Morozova, Vyacheslav Morozov, Brad G. Hoffman, Cheryl D. Helgason, Marco A. Marra

published 12 Sep 2008

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High-Throughput, Kingdom-Wide Prediction and Annotation of Bacterial Non-Coding RNAs

Jonathan Livny, Hidayat Teonadi, Miron Livny, Matthew K. Waldor

published 12 Sep 2008

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Genomic Analysis of Differentiation between Soil Types Reveals Candidate Genes for Local Adaptation in Arabidopsis lyrata

Thomas L. Turner, Eric J. von Wettberg, Sergey V. Nuzhdin

published 11 Sep 2008

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Identification of PLCL1 Gene for Hip Bone Size Variation in Females in a Genome-Wide Association Study

Yao-Zhong Liu, Scott G. Wilson, Liang Wang, Xiao-Gang Liu, Yan-Fang Guo, Jian Li, Han Yan, Panos Deloukas, Nicole Soranzo, Usha Chinnapen-Horsley, Alesandra Cervino, Frances M. Williams, Dong-Hai Xiong, Yin-Ping Zhang, Tian-Bo Jin, Shawn Levy, Christopher J. Papasian, Betty M. Drees, James J. Hamilton, Robert R. Recker, Tim D. Spector, Hong-Wen Deng

published 08 Sep 2008

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Extensive Adaptive Changes Occur in the Transcriptome of Streptococcus agalactiae (Group B Streptococcus) in Response to Incubation with Human Blood

Laurent Mereghetti, Izabela Sitkiewicz, Nicole M. Green, James M. Musser

published 04 Sep 2008

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Longer First Introns Are a General Property of Eukaryotic Gene Structure

Keith R. Bradnam, Ian Korf

published 29 Aug 2008

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Horizontal Gene Transfers Link a Human MRSA Pathogen to Contagious Bovine Mastitis Bacteria

Thomas Brody, Amarendra S. Yavatkar, Yong Lin, Jermaine Ross, Alexander Kuzin, Mukta Kundu, Yang Fann, Ward F. Odenwald

published 27 Aug 2008

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Transcriptome-Wide Assessment of Human Brain and Lymphocyte Senescence

Mun-Gwan Hong, Amanda J. Myers, Patrik K. E. Magnusson, Jonathan A. Prince

published 20 Aug 2008

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A Resource for Transcriptomic Analysis in the Mouse Brain

Charles Plessy, Michela Fagiolini, Akiko Wagatsuma, Norihiro Harasawa, Takenobu Kuji, Atsuko Asaka-Oba, Yukari Kanzaki, Sayaka Fujishima, Kazunori Waki, Hiroyuki Nakahara, Takao K. Hensch, Piero Carninci

published 20 Aug 2008

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Stochastic and Regulatory Role of Chromatin Silencing in Genomic Response to Environmental Changes

Jung Kyoon Choi, Sohyun Hwang, Young-Joon Kim

published 20 Aug 2008

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Prognostic Breast Cancer Signature Identified from 3D Culture Model Accurately Predicts Clinical Outcome across Independent Datasets

Katherine J. Martin, Denis R. Patrick, Mina J. Bissell, Marcia V. Fournier

published 20 Aug 2008

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