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Genome analysis

Germ Warfare in a Microbial Mat Community: CRISPRs Provide Insights into the Co-Evolution of Host and Viral Genomes

John F. Heidelberg, William C. Nelson, Thomas Schoenfeld, Devaki Bhaya

published 09 Jan 2009

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IL2RA/CD25 Gene Polymorphisms: Uneven Association with Multiple Sclerosis (MS) and Type 1 Diabetes (T1D)

Antonio Alcina, María Fedetz, Dorothy Ndagire, Oscar Fernández, Laura Leyva, Miguel Guerrero, María M. Abad-Grau, Carmen Arnal, Concepción Delgado, Miguel Lucas, Guillermo Izquierdo, Fuencisla Matesanz

published 06 Jan 2009

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High-Resolution Analysis of the 5′-End Transcriptome Using a Next Generation DNA Sequencer

Shin-ichi Hashimoto, Wei Qu, Budrul Ahsan, Katsumi Ogoshi, Atsushi Sasaki, Yoichiro Nakatani, Yongjun Lee, Masako Ogawa, Akio Ametani, Yutaka Suzuki, Sumio Sugano, Clarence C. Lee, Robert C. Nutter, Shinichi Morishita, Kouji Matsushima

published 01 Jan 2009

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Topoisomerase IIβ Activates a Subset of Neuronal Genes that Are Repressed in AT-Rich Genomic Environment

Kuniaki Sano, Mary Miyaji-Yamaguchi, Kimiko M. Tsutsui, Ken Tsutsui

published 31 Dec 2008

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Origins of the Xylella fastidiosa Prophage-Like Regions and Their Impact in Genome Differentiation

Alessandro de Mello Varani, Rangel Celso Souza, Helder I. Nakaya, Wanessa Cristina de Lima, Luiz Gonzaga Paula de Almeida, Elliot Watanabe Kitajima, Jianchi Chen, Edwin Civerolo, Ana Tereza Ribeiro Vasconcelos, Marie-Anne Van Sluys

published 31 Dec 2008

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Is Replication the Gold Standard for Validating Genome-Wide Association Findings?

Yong-Jun Liu, Christopher J. Papasian, Jian-Feng Liu, James Hamilton, Hong-Wen Deng

published 29 Dec 2008

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Genome-Wide Co-Expression Analysis in Multiple Tissues

Ian C. Grieve, Nicholas J. Dickens, Michal Pravenec, Vladimir Kren, Norbert Hubner, Stuart A. Cook, Timothy J. Aitman, Enrico Petretto, Jonathan Mangion

published 29 Dec 2008

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Comparing Platforms for C. elegans Mutant Identification Using High-Throughput Whole-Genome Sequencing

Yufeng Shen, Sumeet Sarin, Ye Liu, Oliver Hobert, Itsik Pe'er

published 24 Dec 2008

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Distinct Genetic Loci Control Plasma HIV-RNA and Cellular HIV-DNA Levels in HIV-1 Infection: The ANRS Genome Wide Association 01 Study

Cyril Dalmasso, Wassila Carpentier, Laurence Meyer, Christine Rouzioux, Cécile Goujard, Marie-Laure Chaix, Olivier Lambotte, Véronique Avettand-Fenoel, Sigrid Le Clerc, Laure Denis de Senneville, Christiane Deveau, Faroudy Boufassa, Patrice Debré, Jean-François Delfraissy, Philippe Broet, Ioannis Theodorou

published 24 Dec 2008

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A Snapshot of CNVs in the Pig Genome

João Fadista, Marianne Nygaard, Lars-Erik Holm, Bo Thomsen, Christian Bendixen

published 16 Dec 2008

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STOX1 Overexpression in Choriocarcinoma Cells Mimics Transcriptional Alterations Observed in Preeclamptic Placentas

Virginie Rigourd, Caroline Chauvet, Sonia T. Chelbi, Régis Rebourcet, Françoise Mondon, Franck Letourneur, Thérèse-Marie Mignot, Sandrine Barbaux, Daniel Vaiman

published 11 Dec 2008

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Computational Analysis and Experimental Validation of Gene Predictions in Toxoplasma gondii

Joseph M. Dybas, Carlos J. Madrid-Aliste, Fa-Yun Che, Edward Nieves, Dmitry Rykunov, Ruth Hogue Angeletti, Louis M. Weiss, Kami Kim, Andras Fiser

published 09 Dec 2008

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GeneDistiller—Distilling Candidate Genes from Linkage Intervals

Dominik Seelow, Jana Marie Schwarz, Markus Schuelke

published 05 Dec 2008

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