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Genome analysis

Distribution and Effects of Nonsense Polymorphisms in Human Genes

Yumi Yamaguchi-Kabata, Makoto K. Shimada, [ ... ], Tadashi Imanishi

Probing Metagenomics by Rapid Cluster Analysis of Very Large Datasets

Weizhong Li, John C. Wooley, Adam Godzik

MetaSim—A Sequencing Simulator for Genomics and Metagenomics

Daniel C. Richter, Felix Ott, [ ... ], Daniel H. Huson

Refinement of Light-Responsive Transcript Lists Using Rice Oligonucleotide Arrays: Evaluation of Gene-Redundancy

Ki-Hong Jung, Christopher Dardick, [ ... ], Pamela C. Ronald

Evolution of the Aging Brain Transcriptome and Synaptic Regulation

Patrick M. Loerch, Tao Lu, [ ... ], Bruce A. Yankner

Species Specificity in Major Urinary Proteins by Parallel Evolution

Darren W. Logan, Tobias F. Marton, Lisa Stowers

Updated Three-Stage Model for the Peopling of the Americas

Connie J. Mulligan, Andrew Kitchen, Michael M. Miyamoto

The Evolving Transcriptome of Head and Neck Squamous Cell Carcinoma: A Systematic Review

Yau-Hua Yu, Hsu-Ko Kuo, Kuo-Wei Chang

A Seriation Approach for Visualization-Driven Discovery of Co-Expression Patterns in Serial Analysis of Gene Expression (SAGE) Data

Olena Morozova, Vyacheslav Morozov, [ ... ], Marco A. Marra

High-Throughput, Kingdom-Wide Prediction and Annotation of Bacterial Non-Coding RNAs

Jonathan Livny, Hidayat Teonadi, Miron Livny, Matthew K. Waldor

Genomic Analysis of Differentiation between Soil Types Reveals Candidate Genes for Local Adaptation in Arabidopsis lyrata

Thomas L. Turner, Eric J. von Wettberg, Sergey V. Nuzhdin

Identification of PLCL1 Gene for Hip Bone Size Variation in Females in a Genome-Wide Association Study

Yao-Zhong Liu, Scott G. Wilson, [ ... ], Hong-Wen Deng

Extensive Adaptive Changes Occur in the Transcriptome of Streptococcus agalactiae (Group B Streptococcus) in Response to Incubation with Human Blood

Laurent Mereghetti, Izabela Sitkiewicz, Nicole M. Green, James M. Musser

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