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Genome analysis

Consistency Analysis of Redundant Probe Sets on Affymetrix Three-Prime Expression Arrays and Applications to Differential mRNA Processing

Xiangqin Cui, Ann E. Loraine

Full Sequence and Comparative Analysis of the Plasmid pAPEC-1 of Avian Pathogenic E. coli χ7122 (O78∶K80∶H9)

Melha Mellata, Jeffrey W. Touchman, Roy Curtiss III

Complete Genome Sequence of the Aerobic CO-Oxidizing Thermophile Thermomicrobium roseum

Dongying Wu, Jason Raymond, [ ... ], Jonathan A. Eisen

Germ Warfare in a Microbial Mat Community: CRISPRs Provide Insights into the Co-Evolution of Host and Viral Genomes

John F. Heidelberg, William C. Nelson, Thomas Schoenfeld, Devaki Bhaya

IL2RA/CD25 Gene Polymorphisms: Uneven Association with Multiple Sclerosis (MS) and Type 1 Diabetes (T1D)

Antonio Alcina, María Fedetz, [ ... ], Fuencisla Matesanz

High-Resolution Analysis of the 5′-End Transcriptome Using a Next Generation DNA Sequencer

Shin-ichi Hashimoto, Wei Qu, [ ... ], Kouji Matsushima

Topoisomerase IIβ Activates a Subset of Neuronal Genes that Are Repressed in AT-Rich Genomic Environment

Kuniaki Sano, Mary Miyaji-Yamaguchi, Kimiko M. Tsutsui, Ken Tsutsui

Origins of the Xylella fastidiosa Prophage-Like Regions and Their Impact in Genome Differentiation

Alessandro de Mello Varani, Rangel Celso Souza, [ ... ], Marie-Anne Van Sluys

Is Replication the Gold Standard for Validating Genome-Wide Association Findings?

Yong-Jun Liu, Christopher J. Papasian, [ ... ], Hong-Wen Deng

Genome-Wide Co-Expression Analysis in Multiple Tissues

Ian C. Grieve, Nicholas J. Dickens, [ ... ], Jonathan Mangion

Comparing Platforms for C. elegans Mutant Identification Using High-Throughput Whole-Genome Sequencing

Yufeng Shen, Sumeet Sarin, [ ... ], Itsik Pe'er

Distinct Genetic Loci Control Plasma HIV-RNA and Cellular HIV-DNA Levels in HIV-1 Infection: The ANRS Genome Wide Association 01 Study

Cyril Dalmasso, Wassila Carpentier, [ ... ], Ioannis Theodorou

A Snapshot of CNVs in the Pig Genome

João Fadista, Marianne Nygaard, [ ... ], Christian Bendixen

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