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Genome analysis

Whole-genome analysis of Lysinibacillus boronitolerans MSR1: A dairy-isolated multidrug-resistant and non-pathogenic strain

Md. Shahedur Rahman, Md. Tofidul Islam, Mahadi Hasan, Md. Tariquzzaman, Nure Sharaf Nower Samia, Md. Mahfuzur Rahman, Mustafizur Rahman

published 12 Dec 2025

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Identification of transposable elements and satellite DNA in the Neotropical species Drosophila amaguana from the Ecuadorian Andean Forests

Manuel Alejandro Coba-Males, Simon Orozco-Arias, Romain Guyot, Doris Vela

published 10 Dec 2025

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Computation suggests that the cell adhesion sub-proteome is enriched for sites of pH-dependence and charge burial

Shalaw Sallah, Jim Warwicker

published 09 Dec 2025

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Association between Anti-Helicobacter pylori IgG seropositivity on coronary heart disease and potential pathogenesis: a Mendelian randomization study

Jing Wang, Tianying Chang, Yiqiang Wang, Jinling Zhang, Rui Chen, Le Liu, Yingzi Cui, Hongguang Jin

published 09 Dec 2025

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Chloroplast genome analysis and phylogenetic position of Polygonatum sinopubescens and comparison with related species

Zhong-Mei Mo, Chun-Mou Wei, Hai-Ying Yu, Chuan-Dong Yang

published 05 Dec 2025

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Co-regulation of microglial subgroups in Alzheimer’s amyloid pathology: Implications for diagnosis and drug development

Yu Zhou, Yukuan Huang, Yangchang Fan, Feng Xue

published 05 Dec 2025

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Neisseria meningitidis serogroup B causing invasive disease, Italy, 2010–2021

Paola Vacca, Fenicia Vescio, Fortunato D’Ancona, Cecilia Fazio, Arianna Neri, Anna Carannante, Luigina Ambrosio, Florigio Romano Lista, Silvia Fillo, Andrea Ciammaruconi, Antonella Fortunato, Paola Stefanelli

published 05 Dec 2025

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Beyond accuracy: Quantifying the reliability of multiple instance learning for whole slide image classification

Hassan Keshvarikhojasteh, Marc Aubreville, Christof A. Bertram, Josien P. W. Pluim, Mitko Veta

published 05 Dec 2025

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Updated resource of 180K soybean SNP genotyping array based on the T2T reference genome

Ji-Hun Hwang, Sungwoo Lee, Ju Seok Lee, Kyung Do Kim

published 05 Dec 2025

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A protocol for using human genetic data to identify circulating protein level changes that are the causal consequence of cancer processes

Lisa M. Hobson, Richard M. Martin, Karl Smith-Byrne, George Davey Smith, Gibran Hemani, Joseph H. Gilbody, James Yarmolinsky, Sarah E.R. Bailey, Lucy J. Goudswaard, Philip C. Haycock

published 05 Dec 2025

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Housing environment bilaterally alters transcriptomic profile in the rat hippocampal CA1 region

Azusa Kubota, Kentaro Kojima, Shinnosuke Koketsu, Takayuki Kannon, Takehiro Sato, Kazuyoshi Hosomichi, Yoshiaki Shinohara, Atsushi Tajima

published 04 Dec 2025

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Decoding the distinct immune landscape and possible regulatory mechanisms of autoimmune hepatitis through integrated single-cell and bulk RNA sequencing

Gang Chi, Yijia Che, Jinhong Pei, Xueqing Li, Junmei Wang

published 04 Dec 2025

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Identification of oxidative stress-responsive genes in recurrent miscarriage and their role in disease pathogenesis

Mian Wang, Lingling Zhu, Xiaoyan Cheng

published 02 Dec 2025

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