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Genome analysis

Systematic Analysis of Cis-Elements in Unstable mRNAs Demonstrates that CUGBP1 Is a Key Regulator of mRNA Decay in Muscle Cells

Jerome E. Lee, Ju Youn Lee, [ ... ], Carol J. Wilusz

Complete Nucleotide Sequence of CTX-M-15-Plasmids from Clinical Escherichia coli Isolates: Insertional Events of Transposons and Insertion Sequences

Annemieke Smet, Filip Van Nieuwerburgh, [ ... ], Freddy Haesebrouck

Oncoproteomic Analysis Reveals Co-Upregulation of RELA and STAT5 in Carboplatin Resistant Ovarian Carcinoma

Natini Jinawath, Chanont Vasoontara, [ ... ], Ie-Ming Shih

Targeted Genome-Wide Enrichment of Functional Regions

Periannan Senapathy, Ashwini Bhasi, [ ... ], Sakthivel Sadayappan

Statistical Tests for Associations between Two Directed Acyclic Graphs

Robert Hoehndorf, Axel-Cyrille Ngonga Ngomo, Michael Dannemann, Janet Kelso

Genetic Loci Involved in Antibody Response to Mycobacterium avium ssp. paratuberculosis in Cattle

Giulietta Minozzi, Laura Buggiotti, [ ... ], John L. Williams

Acetaminophen Modulates the Transcriptional Response to Recombinant Interferon-β

Aaron Farnsworth, Anathea S. Flaman, [ ... ], Xuguang Li

Endosymbiont DNA in Endobacteria-Free Filarial Nematodes Indicates Ancient Horizontal Genetic Transfer

Samantha N. McNulty, Jeremy M. Foster, [ ... ], Peter U. Fischer

Gene Set-Based Module Discovery Decodes cis-Regulatory Codes Governing Diverse Gene Expression across Human Multiple Tissues

Atsushi Niida, Seiya Imoto, [ ... ], Satoru Miyano

Utilizing Genotype Imputation for the Augmentation of Sequence Data

Brooke L. Fridley, Gregory Jenkins, [ ... ], Robert Freimuth

De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads

Harish Nagarajan, Jessica E. Butler, [ ... ], Christian L. Barrett

Oligonucleotide Sequence Motifs as Nucleosome Positioning Signals

Clayton K. Collings, Alfonso G. Fernandez, [ ... ], John N. Anderson

Organization of the cpe Locus in CPE-Positive Clostridium perfringens Type C and D Isolates

Jihong Li, Kazuaki Miyamoto, Sameera Sayeed, Bruce A. McClane

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