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Genome analysis

Length Bias Correction in Gene Ontology Enrichment Analysis Using Logistic Regression

Gu Mi, Yanming Di, Sarah Emerson, Jason S. Cumbie, Jeff H. Chang

published 02 Oct 2012

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Integrating Constitutive Gene Expression and Chemoactivity: Mining the NCI60 Anticancer Screen

David G. Covell

published 02 Oct 2012

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A Statistical Framework for Accurate Taxonomic Assignment of Metagenomic Sequencing Reads

Hongmei Jiang, Lingling An, Simon M. Lin, Gang Feng, Yuqing Qiu

published 01 Oct 2012

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Can Genetic Pleiotropy Replicate Common Clinical Constellations of Cardiovascular Disease and Risk?

Omri Gottesman, Esther Drill, Vaneet Lotay, Erwin Bottinger, Inga Peter

published 28 Sep 2012

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Long Span DNA Paired-End-Tag (DNA-PET) Sequencing Strategy for the Interrogation of Genomic Structural Mutations and Fusion-Point-Guided Reconstruction of Amplicons

Fei Yao, Pramila N. Ariyaratne, Axel M. Hillmer, Wah Heng Lee, Guoliang Li, Audrey S. M. Teo, Xing Yi Woo, Zhenshui Zhang, Jieqi P. Chen, Wan Ting Poh, Kelson F. B. Zawack, Chee Seng Chan, See Ting Leong, Say Chuan Neo, Poh Sum D. Choi, Song Gao, Niranjan Nagarajan, Hervé Thoreau, Atif Shahab, Xiaoan Ruan, Valère Cacheux-Rataboul, Chia-Lin Wei, Guillaume Bourque, Wing-Kin Sung, Edison T. Liu, Yijun Ruan

published 28 Sep 2012

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De Novo Foliar Transcriptome of Chenopodium amaranticolor and Analysis of Its Gene Expression During Virus-Induced Hypersensitive Response

Yongqiang Zhang, Xinwu Pei, Chao Zhang, Zifeng Lu, Zhixing Wang, Shirong Jia, Weimin Li

published 28 Sep 2012

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Lactase Persistence and Lipid Pathway Selection in the Maasai

Kshitij Wagh, Aatish Bhatia, Gabriela Alexe, Anupama Reddy, Vijay Ravikumar, Michael Seiler, Michael Boemo, Ming Yao, Lee Cronk, Asad Naqvi, Shridar Ganesan, Arnold J. Levine, Gyan Bhanot

published 28 Sep 2012

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Genome-Wide Association Studies of Asthma in Population-Based Cohorts Confirm Known and Suggested Loci and Identify an Additional Association near HLA

Adaikalavan Ramasamy, Mikko Kuokkanen, Sailaja Vedantam, Zofia K. Gajdos, Alexessander Couto Alves, Helen N. Lyon, Manuel A. R. Ferreira, David P. Strachan, Jing Hua Zhao, Michael J. Abramson, Matthew A. Brown, Lachlan Coin, Shyamali C. Dharmage, David L. Duffy, Tari Haahtela, Andrew C. Heath, Christer Janson, Mika Kähönen, Kay-Tee Khaw, Jaana Laitinen, Peter Le Souef, Terho Lehtimäki, Australian Asthma Genetics Consortium collaborators , Pamela A. F. Madden, Guy B. Marks, Nicholas G. Martin, Melanie C. Matheson, Cameron D. Palmer, Aarno Palotie, Anneli Pouta, Colin F. Robertson, Jorma Viikari, Elisabeth Widen, Matthias Wjst, Deborah L. Jarvis, Grant W. Montgomery, Philip J. Thompson, Nick Wareham, Johan Eriksson, Pekka Jousilahti, Tarja Laitinen, Juha Pekkanen, Olli T. Raitakari, George T. O'Connor, Veikko Salomaa, Marjo-Riitta Jarvelin, Joel N. Hirschhorn

published 28 Sep 2012

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Associations between Variation in CHRNA5-CHRNA3-CHRNB4, Body Mass Index and Blood Pressure in the Northern Finland Birth Cohort 1966

Marika Kaakinen, Francesca Ducci, Mikko J. Sillanpää, Esa Läärä, Marjo-Riitta Järvelin

published 27 Sep 2012

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Copy Number Variation in Subjects with Major Depressive Disorder Who Attempted Suicide

Roy H. Perlis, Douglas Ruderfer, Steven P. Hamilton, Carl Ernst

published 27 Sep 2012

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A Single Nucleotide Polymorphism within DUSP9 Is Associated with Susceptibility to Type 2 Diabetes in a Japanese Population

Hisashi Fukuda, Minako Imamura, Yasushi Tanaka, Minoru Iwata, Hiroshi Hirose, Kohei Kaku, Hiroshi Maegawa, Hirotaka Watada, Kazuyuki Tobe, Atsunori Kashiwagi, Ryuzo Kawamori, Shiro Maeda

published 27 Sep 2012

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Transcriptomic Responses to Salinity Stress in the Pacific Oyster Crassostrea gigas

Xuelin Zhao, Hong Yu, Lingfeng Kong, Qi Li

published 27 Sep 2012

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Paired-End Sequencing of Long-Range DNA Fragments for De Novo Assembly of Large, Complex Mammalian Genomes by Direct Intra-Molecule Ligation

Asan, Chunyu Geng, Yan Chen, Kui Wu, Qingle Cai, Yu Wang, Yongshan Lang, Hongzhi Cao, Huangming Yang, Jian Wang, Xiuqing Zhang

published 27 Sep 2012

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