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Genome analysis

Genome-wide identification, classification, and characterization of lectin gene superfamily in sweet orange (Citrus sinensis L.)

Fee Faysal Ahmed, Farah Sumaiya Dola, Fatema Tuz Zohra, Shaikh Mizanur Rahman, Jesmin Naher Konak, Md. Abdur Rauf Sarkar

published 13 Nov 2023

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Exploring multisite heterogeneity of human basal cell carcinoma proteome and transcriptome

Ariel Berl, Ofir Shir-az, Ilai Genish, Hadas Biran, Din Mann, Amrita Singh, Julia Wise, Vladimir Kravtsov, Debora Kidron, Alexander Golberg, Edward Vitkin, Zohar Yakhini, Avshalom Shalom

published 10 Nov 2023

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Genome-wide association analysis of anthracnose resistance in the Yellow Bean Collection of Common Bean

Kuwabo Kuwabo, Swivia M. Hamabwe, Paul Kachapulula, Karen Cichy, Travis Parker, Chikoti Mukuma, Kelvin Kamfwa

published 10 Nov 2023

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SRplot: A free online platform for data visualization and graphing

Doudou Tang, Mingjie Chen, Xinhua Huang, Guicheng Zhang, Lin Zeng, Guangsen Zhang, Shangjie Wu, Yewei Wang

published 09 Nov 2023

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Improved meta-analysis pipeline ameliorates distinctive gene regulators of diabetic vasculopathy in human endothelial cell (hECs) RNA-Seq data

Diksha Pandey, Onkara Perumal P.

published 09 Nov 2023

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Differential gene expression between viruliferous and non-viruliferous Schizaphis graminum (Rondani)

Yan M. Crane, Charles F. Crane, Brandon J. Schemerhorn

published 08 Nov 2023

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Characterization of polarization states of canine monocyte derived macrophages

Qingkang Lyu, Edwin J. A. Veldhuizen, Irene S. Ludwig, Victor P. M. G. Rutten, Willem van Eden, Alice J. A. M. Sijts, Femke Broere

published 08 Nov 2023

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Colonic mucosal associated invariant T cells in Crohn’s disease have a diverse and non-public T cell receptor beta chain repertoire

Andrew J. Konecny, Donna M. Shows, James D. Lord

published 03 Nov 2023

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De novo assembly of Iron-Heart Cunninghamia lanceolata transcriptome and EST-SSR marker development for genetic diversity analysis

Sen Liu, Gongxiu He, Gongliang Xie, Yamei Gong, Ninghua Zhu, Can Xiao

published 02 Nov 2023

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PRMT5 and CDK4/6 inhibition result in distinctive patterns of alternative splicing in melanoma

Lok Hang Chan, Peihan Wang, Shatha Abuhammad, Lydia Rui Jia Lim, Joseph Cursons, Karen E. Sheppard, David L. Goode

published 02 Nov 2023

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Levodopa-induced dyskinesia in early-onset Parkinson’s disease (EOPD) associates with glucocerebrosidase mutation: A next-generation sequencing study in EOPD patients in Thailand

Sekh Thanprasertsuk, Prasit Phowthongkum, Thitipong Hopetrungraung, Chalalai Poorirerngpoom, Tikumphorn Sathirapatya, Patsorn Wichit, Onanong Phokaewvarangkul, Kornkiat Vongpaisarnsin, Saknan Bongsebandhu-phubhakdi, Roongroj Bhidayasiri

published 31 Oct 2023

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RNA-seq RNAaccess identified as the preferred method for gene expression analysis of low quality FFPE samples

Kai Song, Emon Elboudwarej, Xi Zhao, Luting Zhuo, David Pan, Jinfeng Liu, Carrie Brachmann, Scott D. Patterson, Oh Kyu Yoon, Marianna Zavodovskaya

published 26 Oct 2023

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Transcriptomic data exploring the effect of agave fructans on the induction of the defense system in avocado fruit

Esther Angélica Cuéllar-Torres, Selene Aguilera-Aguirre, Ulises Miguel López-García, Miguel Ángel Hernández-Oñate, Efigenia Montalvo-González, Rosa Isela Ortiz-Basurto, Julio Vega-Arreguín, Alejandra Chacón-López

published 26 Oct 2023

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