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Genome analysis

Genomic Analysis of Pseudomonas putida Phage tf with Localized Single-Strand DNA Interruptions

Anatoly S. Glukhov, Antonina I. Krutilina, [ ... ], Leonid A. Kulakov

The Search for Therapeutic Bacteriophages Uncovers One New Subfamily and Two New Genera of Pseudomonas-Infecting Myoviridae

Marine Henry, Louis-Marie Bobay, [ ... ], Laurent Debarbieux

Optimization of differentiation and transcriptomic profile of THP-1 cells into macrophage by PMA

Tiezhu Liu, Tao Huang, [ ... ], Mifang Liang

Gene Ontology and KEGG Pathway Enrichment Analysis of a Drug Target-Based Classification System

Lei Chen, Chen Chu, [ ... ], Yu-Dong Cai

The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions

Sinead C. Leahy, William J. Kelly, [ ... ], Graeme T. Attwood

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

Robert Kofler, Pablo Orozco-terWengel, [ ... ], Christian Schlötterer

Effective DNA/RNA Co-Extraction for Analysis of MicroRNAs, mRNAs, and Genomic DNA from Formalin-Fixed Paraffin-Embedded Specimens

Adam Kotorashvili, Andrew Ramnauth, [ ... ], Olivier Loudig

Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone

Ron Pinhasi, Daniel Fernandes, [ ... ], Michael Hofreiter

High Throughput Gene Expression Measurement with Real Time PCR in a Microfluidic Dynamic Array

Sandra L. Spurgeon, Robert C. Jones, Ramesh Ramakrishnan

MetaSim—A Sequencing Simulator for Genomics and Metagenomics

Daniel C. Richter, Felix Ott, [ ... ], Daniel H. Huson

Quickly Finding Orthologs as Reciprocal Best Hits with BLAT, LAST, and UBLAST: How Much Do We Miss?

Natalie Ward, Gabriel Moreno-Hagelsieb

Genetic Factors Are Not the Major Causes of Chronic Diseases

Stephen M. Rappaport

Integrated Analysis of Gene Expression, CpG Island Methylation, and Gene Copy Number in Breast Cancer Cells by Deep Sequencing

Zhifu Sun, Yan W. Asmann, [ ... ], E. Aubrey Thompson

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