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Genome analysis

Single-cell transcriptomics of bronchoalveolar lavage reveals divergent macrophage subpopulations and trajectories in interstitial lung disease

Lai-Ying Zhang, Peter C. Allen, Viviana P. Lutzky, Simon H. Apte, Penny L. Groves, Maxine E. Tan, Tharushi De Silva, Eleanor R. Spenceley, Rachael A. McCloy, Quan H. Nguyen, Joseph E. Powell, Daniel C. Chambers, Brendan J. O’Sullivan

published 29 Apr 2026

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Integration of a neuronal RNAseq dataset with the draft Gryllus bimaculatus transcriptome refines gene predictions and highlights potential systematic response to injury

Felicia F. Wang, Harrison P. Fisher, Lisa M. Ledwidge, Joel H. Graber, Riley A. Grindle, Jarod A. Rollins, Hadley W. Horch

published 29 Apr 2026

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Gene expression dynamics in wound healing: Comparative analysis between the wound edge and center

Ksenia Zlobina, Elham Aslankoohi, Marco Rolandi, Rivkah Isseroff, Marcella Gomez

published 27 Apr 2026

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Biomarkers of mitochondrial dynamics in idiopathic pulmonary fibrosis: Identification and validation through transcriptomic and single-cell analyses

Yongbin Wang, Peng Cheng, Zixiang Meng, Ying Zhang, Yan Li, Feifei Feng

published 23 Apr 2026

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Beyond Clavulanic Acid biosynthesis: Exploring the broad regulatory impact of BldD in Streptomyces clavuligerus ATCC 27064

Luisa F. Patiño, Carlos Caicedo-Montoya, Rigoberto Ríos-Estepa

published 22 Apr 2026

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The complete mitochondrial genome of Holothuria atra (Holothuriida: Holothuriidae: Holothuria) and its structural characteristics

Jinjin Wang, Jianlong Ge, Meijie Liao, Bin Li, Xiaojun Rong, Yingeng Wang, Aijun Cui, Xiaodong Bian, Mingliang Sun, Qingyu Zhang

published 17 Apr 2026

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A novel SLC20A2 nonsense variant and mechanistic studies of primary brain calcification

Yi Li, Lamei Yuan, Han Chen, Wen Zheng, Hongbo Xu, Zhijian Yang, Dan He, Hao Deng

published 17 Apr 2026

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Multiomics profiling of zebrafish embryonic cell line PAC2 across growth phases to assess its relevance for toxicological studies

Mihai-Ovidiu Degeratu, Jessica Bertoli, Nikolai Huwa, David Lopez Rodriguez, Marion Revel, René Schönenberger, Colette vom Berg, Kristin Schirmer, Ksenia J. Groh

published 17 Apr 2026

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Risk prediction for cardiovascular related diseases using PRS and EHR in the Framingham Heart Study

Taegun Kim, Jaeseung Song, Jong Wha J. Joo

published 17 Apr 2026

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Revisiting co-expression-based automated function prediction in yeast with neural networks and updated Gene Ontology annotations

Cole E. McGuire, Matthew A. Hibbs

published 16 Apr 2026

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Exploration of schizophrenia-associated gene modules using graph theory, co-expression networks, and dimensionality reduction

Costas Bampos, Vasileios Megalooikonomou

published 15 Apr 2026

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Bioinformatics analysis and qRT-PCR validation of iron metabolism-related genes in pediatric asthma

Liang Liu, Yingying Sun, Yu Wang, Xiaofei Xie, Lina Wei

published 15 Apr 2026

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Stage-specific screening reveals differential resilience response to cold stress in rice

Fahamida Akter, Partha S. Biswas, Abul Kalam Mohammad Aminul Islam, Mohammad Sharif Raihan, Md. Mizanur Rahman, Khandakar Md. Iftekharuddaula, Mohammad Rafiqul Islam, John Damien Platten

published 15 Apr 2026

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