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Genome analysis

An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis

Cristian Del Fabbro, Simone Scalabrin, Michele Morgante, Federico M. Giorgi

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

Daniele Merico, Ruth Isserlin, [ ... ], Gary D. Bader

A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, [ ... ], Bairong Shen

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

Patrick D. Schloss, Dirk Gevers, Sarah L. Westcott

The Evolution of Mammalian Gene Families

Jeffery P. Demuth, Tijl De Bie, [ ... ], Matthew W. Hahn

Examining Sources of Error in PCR by Single-Molecule Sequencing

Vladimir Potapov, Jennifer L. Ong

Genetic Structure of Europeans: A View from the North–East

Mari Nelis, Tõnu Esko, [ ... ], Andres Metspalu

Single-nucleus and single-cell transcriptomes compared in matched cortical cell types

Trygve E. Bakken, Rebecca D. Hodge, [ ... ], Bosiljka Tasic

Analytical and Clinical Validation of a Digital Sequencing Panel for Quantitative, Highly Accurate Evaluation of Cell-Free Circulating Tumor DNA

Richard B. Lanman, Stefanie A. Mortimer, [ ... ], AmirAli Talasaz

Whole-Genome Sequencing of the World’s Oldest People

Hinco J. Gierman, Kristen Fortney, [ ... ], Stuart K. Kim

Mind the Gap: Upgrading Genomes with Pacific Biosciences RS Long-Read Sequencing Technology

Adam C. English, Stephen Richards, [ ... ], Richard A. Gibbs

Development of a Prokaryotic Universal Primer for Simultaneous Analysis of Bacteria and Archaea Using Next-Generation Sequencing

Shunsuke Takahashi, Junko Tomita, [ ... ], Miyuki Nishijima

SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data

Rasmus Nielsen, Thorfinn Korneliussen, [ ... ], Jun Wang

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