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Genome analysis

RPIPLM: Prediction of ncRNA-protein interaction by post-training a dual-tower pretrained biological model with supervised contrastive learning

Yiwei Liu, Ting Bao, [ ... ], Yanbin Wang

SpaVGN: A hybrid deep learning framework for high-resolution spatial transcriptomics data reconstruction and spatial domain identification

Haiyan Wang, Yanping Zhang, [ ... ], Chunguang Zhao

Transcriptome profiling and weighted gene co-expression network analysis reveal changes of hub genes and molecular pathways in rat lungs following deep hypothermic circulatory arrest

Lei Wang, Qingtong Wu, [ ... ], Liangwan Chen

Revealing bioremediation potential of novel indigenous bacteria from oil-contaminated sites in the UAE: A combined bioinformatics and experimental validation

Sara Awni Alkhatib, Sagar Arya, [ ... ], Anna-Maria Pappa

Characterization of an unusual carlavirus-like RNA from papaya (Carica papaya) lacking essential genes

Milenka Vera, Raúl Cifuentes, [ ... ], Diego F. Quito-Avila

Identification of novel marker-trait associations for agronomic traits in bread wheat under WANA environments through GWAS

Fatima Henkrar, Zakaria El Gataa, Khaoula Lahrichi, Wuletaw Tadesse

Mendelian randomization analysis: The causal relationship between C-reactive protein and amyloidosis and between C-reactive protein and atherosclerosis

Chunhui Liu, Xupeng Huang, Yongsheng Huang, Hongguang Jin

DNA methylation differences stratified by normalized fetal/placental weight ratios suggest neurodevelopmental deficits in neonates with congenital heart disease

Marin Jacobwitz, Michael Xie, [ ... ], Ana G. Cristancho

Cerebrospinal fluid haptoglobin levels and outcome after aneurysmal subarachnoid haemorrhage: Evidence from Mendelian randomization

Gbenga A. Kayode, Loukas Zagkos, [ ... ], Stephen Burgess

Mechanism of Astragaloside-Brucea javanica oil nanoemulsion against oral squamous cell carcinoma through CDK1/MTFR2: Network pharmacology, bioinformatics, and experimental studies

Yihan Lai, Runqiang Liu, [ ... ], Yisen Shao

Antimicrobial activity of Origanum vulgare L. essential oil and its effects on fungal gene expression

Yan Li, Lu He, [ ... ], Rongjun Li

OpDetect: A convolutional and recurrent neural network classifier for precise and sensitive operon detection from RNA-seq data

Rezvan Karaji, Lourdes Peña-Castillo

Association of FGF Receptor-2rs2981578 SNP with breast cancer in women at the University of Gondar Comprehensive Specialized Hospital, Ethiopia

Mihiret Bogale, Tiget Ayelgn Mengstie, [ ... ], Tewodros Shibabaw

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