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Genome analysis

Large-scale cryptic proteome mining revealed potential phage-mediated host-pathogen genetic exchange in Mycobacterium tuberculosis

Nikhil Bhalla, Nupur Angrish

Unraveling the significance of decorin in endometriosis development through single cell sequencing and experimental approaches

Guansheng Chen, Wenjing Li, Lingyu Liu, Yongjun Wang

An entropy-based framework for genomic variability analysis: A South American case study of human papillomavirus

Alan López Leal, Elizabeth Valdés-Muñoz, [ ... ], Fabián Silva-Aravena

Peripheral leukocyte transcriptomic changes in preweaned Holstein heifer calves with varying stages of Bovine Respiratory Disease

Lindsey C. Makratzakis, Joel A. Velasco, [ ... ], Craig S. McConnel

Multivariate genetic architecture of age-related eye disease

Luqi Gao, Qihao Wang, Chao Zhu

UBE2S emerges as a key driver in an NK cell–based prognostic model for clear cell renal cell carcinoma

Kang Leng, Yiheng Zhou, [ ... ], Hua Song

Analyzing the performance of deep learning splice prediction algorithms

Nathan Fortier, Gabe Rudy, Andreas Scherer

Integrative bioinformatic analysis prioritizes TIMP1 and FN1 as angiogenesis-related candidate genes in diabetic foot ulcers

Xiangjun Hu, Degang Dong, [ ... ], Zhangren Yan

Both conventionally and organically fertilized tomatoes maintain fruit quality through uncontrolled green peach aphid infestation, with a transcriptional shift towards catabolism

June Labbancz, Luke Gustafson, Preston Andrews, Amit Dhingra

Multi-Omics and network-based exploration of potential molecular pathways in heart failure relevant to left bundle branch pacing response heterogeneity: Immune remodeling, hub gene identification, and drug repurposing hypotheses

Xia Sun, Xiang Tang, [ ... ], Mingfeng Jin

Variants in the DNAH11 gene responsible for primary ciliary dyskinesia or probably atypical primary ciliary dyskinesia presenting left-right asymmetry disorder

Kai Zhao, Lamei Yuan, [ ... ], Hao Deng

A snapshot of HIV-1 genetic diversity in Dominican Republic in 2024: Predominance of the B_Car lineage and first description of a CRF02-AG isolate

Lily Soto, Yoneira F. Sulbaran, [ ... ], Flor H. Pujol

The wild, wild west of plasmids: First insights into comparative genomics of Borrelia burgdorferi sensu lato

Sabrina Hepner, Robert E. Rollins, [ ... ], Gabriele Margos

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