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Genome analysis

Benchmarking ensemble and deep learning models for drought-responsive gene prioritisation in rice using multi-omics data

Kumanan N. Govaichelvan, Dharini Pathmanathan, Rabiatul Adawiah Zainal-Abidin, Arpah Abu

published 09 Oct 2026

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Intercellular GAS6-AXL signaling triggers podocyte cuproptosis in acute kidney injury upstream regulated by CEBPD

Jingmei Liang, Yuyun Hu, Bing Liao

published 09 Oct 2026

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Transcriptomic analysis of zebrafish (Danio rerio) liver exposed to sediments from the Loa River

Nataly Lobos-Parra, Natalia V. Leiva, Giovanni Larama, Mariella Rivas, Rodrigo Orrego

published 09 Oct 2026

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Identification of shared diagnostic biomarkers and immune-related mechanisms between sepsis and thoracic aortic aneurysm based on integrated bioinformatics and machine learning approaches

Chengqun She, Hao Deng, Yaoguang Feng, Chaozhong Long, Juan Wu

published 08 Oct 2026

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Genomic inbreeding and selection signatures analyses in the Doberman Pinscher breed

Henrique Mulim-McCarthy, Breno Fragomeni, Sophie Liu, Hinayah Rojas de Oliveira

published 08 Oct 2026

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Genomic diversity, host associations, and tissue tropism of Hydrangea ringspot virus: A global and regional perspective

Juliana Osorio-Marulanda, Juliana Lopez-Jimenez, Juan F. Alzate

published 08 Oct 2026

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Integrative transcriptomics identifies an 18-gene candidate blood-accessible biomarker panel for longitudinal monitoring of spaceflight-induced muscle atrophy

Jae Ho Shim, Ji Yeon Lee, Jihye Han, Hyeon Soo Kim

published 07 Oct 2026

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Shenling Qige Granules inhibit esophageal squamous cell carcinoma progression in TE-1 xenograft and cell-based models by modulating the DCN–TGF-β/Smad signaling axis

Zihui Liu, Yiting Gu, Huanfang Fan, Mao Huang, Dehui Li, Wen Guo, Yun He, Shuang Zhang, Zhihua Du

published 06 Oct 2026

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Integrated multi-omic analysis characterizes an IFNγ-responsive-to-myeloid-suppressive immune continuum in immune-active hepatocellular carcinoma

Luping Lin, Ningna Weng, Huaying Lai, Guangfeng Wu, Jinfeng Lin, Xinjian Wu, Sha Huang, Xiao Chen

published 06 Oct 2026

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GP-DHT: A dual-head transformer with supervised contrastive learning for shared-gene pretraining and single-cell GRN prediction

Shuai Yan, Qingzhi Yu, Wenfeng Dai, Xiang Cheng

published 06 Oct 2026

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Multi-locus genome-wide association analysis of grain yield, plant height, panicle length, and flowering time in the Senegalese pearl millet [Pennisetum glaucum (L.) R. Br.] germplasm

Aliou Ba, Oumar Diack, Thomas L. Odong, Safiétou Tooli Fall, Richard Edema, Arfang Badji, Adama Faye, Tonny Obua, Mildred Ochwo-Ssemakula, Paul Gibson, Mamadou Mar, Jessica B. Bacourine, Yagouba Diao, Mahoussi K. Arnaud Djanta, Ndjido A. Kane, Phinehas Tukamuhabwa

published 06 Oct 2026

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Rigorous validation of graph-based network analysis reappraises biologically coherent ADHD-associated transcriptomic modules in peripheral blood

Nehal M. Ali

published 05 Oct 2026

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Codon-aware multi-scale feature fusion for metagenomic sequence classification

Yan Qian, Quanjie Song, Xinyi Xie, Li Deng

published 05 Oct 2026

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