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RNA structure

Mosaic divergent repeat interruptions of motif length and sequence, mDRILS, of XDP-linked repeats affect formation of DNA/RNA triplexes & quadruplexes

Niousha Sharifi Soltani, Bita Zamiri, [ ... ], Christopher E. Pearson

Identification of an atypical microRNA with sequence variation in the silkworm Bombyx mori

Mayuko Harada, Midori Tabara, [ ... ], Hiroko Tabunoki

Intronic RNA of yeast RPL22 paralogs acts as an allosteric switch

Kateřina Abrhámová, Alexandra Gredová, [ ... ], Petr Folk

scLTF: A self-training clustering framework for large-scale single-cell RNA-Seq data

Hongyi Yuan, Chunyan Wang, [ ... ], Mujie Fan

Patient-specific integration of RNA expression, methylation-derived replication-timing proxies, and histomorphology for pancreatic cancer subtyping

Alejandro Leyva, M. Khalid Khan Niazi

Spatially localized immune metaprograms reveal micro-niche organization in the human Dorsal Root Ganglion

Kyuhyung Choi, Kaehong Lee, Baeki E. Kang, Tae-Min Kim

Structural analysis of recombinant AAV vector genomes at single-molecule resolution

David Rouleau, Dimpal Lata, [ ... ], Ifeyinwa Iwuchukwu

Engineering of T7 DNA-dependent RNA polymerase with activity at elevated temperature

Svenja Hehn, Julia Gutbrod, Maxi Gutjahr, Andreas Marx

DMS-informed secondary structure modeling of Epstein–Barr Virus LMP-1 pre-mRNA defines novel elements spanning introns

Taylor O. Eich, Evelyn C. Coppenbarger, Abdelraouf O. Dapour, Walter N. Moss

Enhanced IGFL1 translation in response to IL-1β is controlled by distinct 3’UTR elements

Giulia Cardamone, Melanie Flohr, [ ... ], Tobias Schmid

GARN3: A coarse-grained helix centered technique for RNA 3D structures prediction

Jhonatan Silva, Johanne Cohen, Daniel Cordeiro

Cache-efficient and vectorized parallel dynamic programming for RNA folding

Mateusz Gruzewski, Marek Palkowski

Effect of HIV-1 subtype-specific Tat protein polymorphisms on Tat-TAR interaction

Alnara Zhamalbekova, Mahmoud A. A. Ibrahim, Peter A. Sidhom, Syed Hani Abidi

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