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RNA alignment

RNA degradation patterns in cardiac tissues kept at different time intervals and temperatures before RNA sequencing

Stine Bøttcher Jacobsen, Jacob Tfelt-Hansen, [ ... ], Jeppe Dyrberg Andersen

Aligned membranes regulate wound healing via MMP12 secreted by macrophages

Hongli Ma, Limin Gong, [ ... ], Chenbing Wang

Next-generation sequencing protocol of hematopoietic stem cells (HSCs). Step-by-step overview and troubleshooting guide

Justyna Jarczak, Kamila Bujko, [ ... ], Magdalena Kucia

Comparison of whole transcriptome sequencing of fresh, frozen, and formalin-fixed, paraffin-embedded cardiac tissue

Stine Bøttcher Jacobsen, Jacob Tfelt-Hansen, [ ... ], Niels Morling

Crystal structure of an RNA/DNA strand exchange junction

Joshua C. Cofsky, Gavin J. Knott, Christine L. Gee, Jennifer A. Doudna

RefShannon: A genome-guided transcriptome assembler using sparse flow decomposition

Shunfu Mao, Lior Pachter, David Tse, Sreeram Kannan

The L motifs of two moss pentatricopeptide repeat proteins are involved in RNA editing but predominantly not in RNA recognition

Takuya Matsuda, Mamoru Sugita, Mizuho Ichinose

RNAmountAlign: Efficient software for local, global, semiglobal pairwise and multiple RNA sequence/structure alignment

Amir H. Bayegan, Peter Clote

Reading canonical and modified nucleobases in 16S ribosomal RNA using nanopore native RNA sequencing

Andrew M. Smith, Miten Jain, [ ... ], Mark Akeson

RNA variant identification discrepancy among splice-aware alignment algorithms

Ji Hyung Hong, Yoon Ho Ko, Keunsoo Kang

Assessing the accuracy of blood RNA profiles to identify patients with post-concussion syndrome: A pilot study in a military patient population

Jimmaline J. Hardy, Scott. R. Mooney, [ ... ], Robert Meller

aPPRove: An HMM-Based Method for Accurate Prediction of RNA-Pentatricopeptide Repeat Protein Binding Events

Thomas Harrison, Jaime Ruiz, [ ... ], Christina Boucher

CHSalign: A Web Server That Builds upon Junction-Explorer and RNAJAG for Pairwise Alignment of RNA Secondary Structures with Coaxial Helical Stacking

Lei Hua, Yang Song, [ ... ], Tamar Schlick

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