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Protein structure networks

Modularity in Protein Complex and Drug Interactions Reveals New Polypharmacological Properties

Jose C. Nacher, Jean-Marc Schwartz

BinTree Seeking: A Novel Approach to Mine Both Bi-Sparse and Cohesive Modules in Protein Interaction Networks

Qing-Ju Jiao, Yan-Kai Zhang, Lu-Ning Li, Hong-Bin Shen

Computational Prediction of Heme-Binding Residues by Exploiting Residue Interaction Network

Rong Liu, Jianjun Hu

Category Theoretic Analysis of Hierarchical Protein Materials and Social Networks

David I. Spivak, Tristan Giesa, Elizabeth Wood, Markus J. Buehler

Deciphering Network Community Structure by Surprise

Rodrigo Aldecoa, Ignacio Marín

Real-Time PyMOL Visualization for Rosetta and PyRosetta

Evan H. Baugh, Sergey Lyskov, Brian D. Weitzner, Jeffrey J. Gray

Failure Tolerance of Motif Structure in Biological Networks

Baharan Mirzasoleiman, Mahdi Jalili

Global Geometric Affinity for Revealing High Fidelity Protein Interaction Network

Yi Fang, William Benjamin, Mengtian Sun, Karthik Ramani

Novel Feature for Catalytic Protein Residues Reflecting Interactions with Other Residues

Yizhou Li, Gongbing Li, [ ... ], Menglong Li

Unveiling Protein Functions through the Dynamics of the Interaction Network

Irene Sendiña–Nadal, Yanay Ofran, [ ... ], Stefano Boccaletti

Assortative Mixing in Close-Packed Spatial Networks

Deniz Turgut, Ali Rana Atilgan, Canan Atilgan

Accurate Protein Structure Annotation through Competitive Diffusion of Enzymatic Functions over a Network of Local Evolutionary Similarities

Eric Venner, Andreas Martin Lisewski, [ ... ], Olivier Lichtarge

NetTurnP – Neural Network Prediction of Beta-turns by Use of Evolutionary Information and Predicted Protein Sequence Features

Bent Petersen, Claus Lundegaard, Thomas Nordahl Petersen

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