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Protein structure networks

Real-Time Dynamics of Emerging Actin Networks in Cell-Mimicking Compartments

Siddharth Deshpande, Thomas Pfohl

Hyperphosphorylation of Intrinsically Disordered Tau Protein Induces an Amyloidogenic Shift in Its Conformational Ensemble

Shaolong Zhu, Agnesa Shala, [ ... ], Derek J. Wilson

Network Propagation with Dual Flow for Gene Prioritization

Shunyao Wu, Fengjing Shao, [ ... ], Jianlong Hu

Improving the Robustness of Complex Networks with Preserving Community Structure

Yang Yang, Zhoujun Li, [ ... ], Senzhang Wang

Structure-Based Network Analysis of Activation Mechanisms in the ErbB Family of Receptor Tyrosine Kinases: The Regulatory Spine Residues Are Global Mediators of Structural Stability and Allosteric Interactions

Kevin A. James, Gennady M. Verkhivker

Community Structure Detection for Overlapping Modules through Mathematical Programming in Protein Interaction Networks

Laura Bennett, Aristotelis Kittas, [ ... ], Sophia Tsoka

Inferring Meaningful Communities from Topology-Constrained Correlation Networks

Jose Sergio Hleap, Christian Blouin

Thermostability of In Vitro Evolved Bacillus subtilis Lipase A: A Network and Dynamics Perspective

Ashutosh Srivastava, Somdatta Sinha

DyCoNet: A Gephi Plugin for Community Detection in Dynamic Complex Networks

Julie Kauffman, Aristotelis Kittas, Laura Bennett, Sophia Tsoka

Exploring Function Prediction in Protein Interaction Networks via Clustering Methods

Kire Trivodaliev, Aleksandra Bogojeska, Ljupco Kocarev

Redistribution of Flexibility in Stabilizing Antibody Fragment Mutants Follows Le Châtelier’s Principle

Tong Li, Malgorzata B. Tracka, [ ... ], Dennis R. Livesay

Allosteric Regulation of the Hsp90 Dynamics and Stability by Client Recruiter Cochaperones: Protein Structure Network Modeling

Kristin Blacklock, Gennady M. Verkhivker

PANADA: Protein Association Network Annotation, Determination and Analysis

Alberto J. M. Martin, Ian Walsh, [ ... ], Silvio C. E. Tosatto

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