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Protein structure networks

Protein model accuracy estimation based on local structure quality assessment using 3D convolutional neural network

Rin Sato, Takashi Ishida

DeepCDpred: Inter-residue distance and contact prediction for improved prediction of protein structure

Shuangxi Ji, Tuğçe Oruç, [ ... ], Peter James Winn

Mutations close to a hub residue affect the distant active site of a GH1 β-glucosidase

Valquiria P. Souza, Cecília M. Ikegami, Guilherme M. Arantes, Sandro R. Marana

Ensemble-based modeling and rigidity decomposition of allosteric interaction networks and communication pathways in cyclin-dependent kinases: Differentiating kinase clients of the Hsp90-Cdc37 chaperone

Gabrielle Stetz, Amanda Tse, Gennady M. Verkhivker

Docking-based modeling of protein-protein interfaces for extensive structural and functional characterization of missense mutations

Didier Barradas-Bautista, Juan Fernández-Recio

Cysteine-rich protein 2 accelerates actin filament cluster formation

Takanori Kihara, Yasunobu Sugimoto, [ ... ], Jun Miyake

Community detection in sequence similarity networks based on attribute clustering

Janamejaya Chowdhary, Frank E. Löffler, Jeremy C. Smith

SiGNet: A signaling network data simulator to enable signaling network inference

Elizabeth A. Coker, Costas Mitsopoulos, Paul Workman, Bissan Al-Lazikani

Structural, Culinary, Nutritional and Anti-Nutritional Properties of High Protein, Gluten Free, 100% Legume Pasta

Karima Laleg, Denis Cassan, [ ... ], Valérie Micard

Secondary Structure Prediction of Protein Constructs Using Random Incremental Truncation and Vacuum-Ultraviolet CD Spectroscopy

Mária Pukáncsik, Ágnes Orbán, [ ... ], Beata G. Vertessy

A Shadowing Problem in the Detection of Overlapping Communities: Lifting the Resolution Limit through a Cascading Procedure

Jean-Gabriel Young, Antoine Allard, Laurent Hébert-Dufresne, Louis J. Dubé

Structural Rigidity and Protein Thermostability in Variants of Lipase A from Bacillus subtilis

Prakash Chandra Rathi, Karl-Erich Jaeger, Holger Gohlke

Mining the Modular Structure of Protein Interaction Networks

Ariel José Berenstein, Janet Piñero, Laura Inés Furlong, Ariel Chernomoretz

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