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Protein structure

Immunoinformatics and reverse vaccinology design of self-amplifying RNA vaccine against marburg virus with structural dynamics and immune simulation analysis

Md. Aftabur Rahman, Lamyea Kabir, [ ... ], Ahmad Abdullah Mahdeen

Structure bioinformatics of eight human ATP synthase F₀ subunits and their AlphaFold3-predicted reduced-hydrophobicity QTY analogues

Ziyu Wang, Edward Chen, Shuguang Zhang

Evolutionary constraint on a core winter proteome across independently cold-adapted PACMAD grasses

Elad Oren, Jingjing Zhai, [ ... ], Maria Cinta Romay

Intronic RNA of yeast RPL22 paralogs acts as an allosteric switch

Kateřina Abrhámová, Alexandra Gredová, [ ... ], Petr Folk

Network of interactions between the tumor necrosis factor superfamily members and small S100 proteins

Victoria A. Rastrygina, Evgenia I. Deryusheva, [ ... ], Sergei E. Permyakov

Comparative evolutionary pharmacogenomics of human prostaglandin-endoperoxide synthase paralogs identifies population-structured coding variation and protein-contextual candidates in N-terminal leader-sequence and catalytic-channel regions

Reuben S. Maghembe

Comprehensive analysis of non-synonymous single-nucleotide polymorphism of human TSC1 and TSC2 genes: An in silico approach

Tasnim Alam, Shangida Akther

Acute Myeloid Leukemia(AML) proteins for in silico drug design using pharmacophore modeling, molecular docking and molecular dynamics simulation

Partho Bosu, Tonmoy Adhikary, [ ... ], Payer Ahmed

In silico framework for designing and validating a multi-stage subunit vaccine against Tuberculosis using reverse vaccinology approach

Ayesha Liaqat, Kubra Dastgir, [ ... ], Muhammad Waheed Akhtar

Assessment of generative de novo peptide design methods for G protein-coupled receptors

Hannes Junker, Clara T. Schoeder

An efficient ranking deep neural network algorithm for the prediction of Ca²⁺ binding sites of the protein

Pritee Parwekar, Samudrala Gourinath, [ ... ], Asmir Butkovic

ProteoMapper: Alignment-aware identification and quantitative analysis of contextual motif–domain patterns in protein families

Sifullah Mahmud Sefa, Joyeeta Sarkar, Arif Hasan Khan Robin, Machbah Uddin

Mapping the chaperonin TRiC/CCT interactome in mouse photoreceptors reveals functional significance for energy metabolism

Celine Brooks, David Salcedo-Tacuma, [ ... ], Maxim Sokolov

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