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Protein structure

Immunoinformatics and reverse vaccinology design of self-amplifying RNA vaccine against marburg virus with structural dynamics and immune simulation analysis

Md. Aftabur Rahman, Lamyea Kabir, Nadia Ahmed, Atish Barua, Mohammad Hasan, Ahmad Abdullah Mahdeen

published 23 Oct 2026

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Structure bioinformatics of eight human ATP synthase F₀ subunits and their AlphaFold3-predicted reduced-hydrophobicity QTY analogues

Ziyu Wang, Edward Chen, Shuguang Zhang

published 23 Oct 2026

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Evolutionary constraint on a core winter proteome across independently cold-adapted PACMAD grasses

Elad Oren, Jingjing Zhai, Travis E. Rooney, Ruthie Angelovici, Charles O. Hale, Lara J. Brindisi, Sheng-Kai Hsu, Christine M. Gault, Jian Hua, Thuy La, Nicholas Lepak, Qin Fu, Edward S. Buckler, Maria Cinta Romay

published 14 Oct 2026

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Intronic RNA of yeast RPL22 paralogs acts as an allosteric switch

Kateřina Abrhámová, Alexandra Gredová, Karolína Navrátilová, Mohamed Boumaiza, Petr Folk

published 01 Oct 2026

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Network of interactions between the tumor necrosis factor superfamily members and small S100 proteins

Victoria A. Rastrygina, Evgenia I. Deryusheva, Alexey S. Kazakov, Andrey S. Sokolov, Maria E. Permyakova, Ekaterina A. Litus, Vladimir N. Uversky, Eugene A. Permyakov, Sergei E. Permyakov

published 29 Sep 2026

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Comparative evolutionary pharmacogenomics of human prostaglandin-endoperoxide synthase paralogs identifies population-structured coding variation and protein-contextual candidates in N-terminal leader-sequence and catalytic-channel regions

Reuben S. Maghembe

published 25 Sep 2026

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Comprehensive analysis of non-synonymous single-nucleotide polymorphism of human TSC1 and TSC2 genes: An in silico approach

Tasnim Alam, Shangida Akther

published 03 Sep 2026

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Acute Myeloid Leukemia(AML) proteins for in silico drug design using pharmacophore modeling, molecular docking and molecular dynamics simulation

Partho Bosu, Tonmoy Adhikary, Abu Sayed Rafi, Naveed Iqbal, Fatima Rasool, Payer Ahmed

published 02 Sep 2026

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In silico framework for designing and validating a multi-stage subunit vaccine against Tuberculosis using reverse vaccinology approach

Ayesha Liaqat, Kubra Dastgir, Muhammad Sajjad, Hafiz Muzzammel Rehman, Muhammad Waheed Akhtar

published 27 Aug 2026

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Assessment of generative de novo peptide design methods for G protein-coupled receptors

Hannes Junker, Clara T. Schoeder

published 27 Aug 2026

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An efficient ranking deep neural network algorithm for the prediction of Ca²⁺ binding sites of the protein

Pritee Parwekar, Samudrala Gourinath, Jaishree Jain, Shilpa Gundagatti, Jabir Ali, Punit Gupta, Asmir Butkovic

published 13 Aug 2026

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ProteoMapper: Alignment-aware identification and quantitative analysis of contextual motif–domain patterns in protein families

Sifullah Mahmud Sefa, Joyeeta Sarkar, Arif Hasan Khan Robin, Machbah Uddin

published 10 Aug 2026

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Mapping the chaperonin TRiC/CCT interactome in mouse photoreceptors reveals functional significance for energy metabolism

Celine Brooks, David Salcedo-Tacuma, Isabella Mascari, Mark Eminhizer, Tuan Ngo, Douglas Kolson, Emily Sechrest, Tongju Guan, Neil Billington, Wen-Tao Deng, David Smith, Jianhai Du, Nikolai Skiba, Maxim Sokolov

published 29 Jul 2026

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