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Macromolecular structure analysis

Mosaic divergent repeat interruptions of motif length and sequence, mDRILS, of XDP-linked repeats affect formation of DNA/RNA triplexes & quadruplexes

Niousha Sharifi Soltani, Bita Zamiri, [ ... ], Christopher E. Pearson

Immunoinformatics and reverse vaccinology design of self-amplifying RNA vaccine against marburg virus with structural dynamics and immune simulation analysis

Md. Aftabur Rahman, Lamyea Kabir, [ ... ], Ahmad Abdullah Mahdeen

Structure bioinformatics of eight human ATP synthase F₀ subunits and their AlphaFold3-predicted reduced-hydrophobicity QTY analogues

Ziyu Wang, Edward Chen, Shuguang Zhang

Evolutionary constraint on a core winter proteome across independently cold-adapted PACMAD grasses

Elad Oren, Jingjing Zhai, [ ... ], Maria Cinta Romay

Identification of an atypical microRNA with sequence variation in the silkworm Bombyx mori

Mayuko Harada, Midori Tabara, [ ... ], Hiroko Tabunoki

Intronic RNA of yeast RPL22 paralogs acts as an allosteric switch

Kateřina Abrhámová, Alexandra Gredová, [ ... ], Petr Folk

Network of interactions between the tumor necrosis factor superfamily members and small S100 proteins

Victoria A. Rastrygina, Evgenia I. Deryusheva, [ ... ], Sergei E. Permyakov

Integrative computational analysis of public fecal lipidomics and transcriptomics datasets suggests a candidate association between the COX-2 pathway and CE(20:4) in colorectal adenoma-carcinoma progression

Bing Tang, Yanru Chen, Xia Yang, Hanlin Gong

Comparative evolutionary pharmacogenomics of human prostaglandin-endoperoxide synthase paralogs identifies population-structured coding variation and protein-contextual candidates in N-terminal leader-sequence and catalytic-channel regions

Reuben S. Maghembe

scLTF: A self-training clustering framework for large-scale single-cell RNA-Seq data

Hongyi Yuan, Chunyan Wang, [ ... ], Mujie Fan

Patient-specific integration of RNA expression, methylation-derived replication-timing proxies, and histomorphology for pancreatic cancer subtyping

Alejandro Leyva, M. Khalid Khan Niazi

Comprehensive analysis of non-synonymous single-nucleotide polymorphism of human TSC1 and TSC2 genes: An in silico approach

Tasnim Alam, Shangida Akther

Targeted lipidomics showed altered serum phosphatidylcholine levels in fearful dogs

Luigi Sacchettino, Michele Costanzo, [ ... ], Danila d’Angelo

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