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DNA structure

Text cryptography and steganography based on RNA sequences generation, true random number generators, and codebook method

Safwat Hamad, Omar Fitian Rashid, Hind M. Al-Dabbas

Two different and robustly modeled DNA binding modes of Competence Protein ComP - systematic modeling with AlphaFold 3, RoseTTAFold2NA, Chai-1 and re-docking in HADDOCK

Stian Aleksander Helsem, Kristian Alfsnes, [ ... ], Ole Herman Ambur

A method for site-specifically tethering the enzyme urease to DNA origami with sustained activity

Ian Murphy, Keren Bobilev, [ ... ], W. Benjamin Rogers

Deciphering the structural consequences of R83 and R152 methylation on DNA polymerase β using molecular modeling

Amit Srivastava, Haitham Idriss, [ ... ], Dirar Homouz

Identification of critical amino acids in the DNA binding domain of LuxO: Lessons from a constitutive active LuxO

Shradha Surin, Richa Singh, [ ... ], Saumya Raychaudhuri

Structural insight into the DNMT1 reaction cycle by cryo-electron microscopy

Inessa De, Jonas Weidenhausen, Nestor Concha, Christoph W. Müller

A label-free G-quadruplex aptamer/gold nanoparticle-based colorimetric biosensor for rapid detection of bovine viral diarrhea virus genotype 1

Parisa Rabiei, Hassan Mohabatkar, Mandana Behbahani

Several supplementary concepts for applied category-theoretical states over an extended Petri net using an example relating to genetic coding: Toward an abstract algebraic formulation of molecular/genetic biology

Jitsuki Sawamura, Shigeru Morishita, Jun Ishigooka

Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure

Anne R. Shim, Jane Frederick, [ ... ], Vadim Backman

Building an ab initio solvated DNA model using Euclidean neural networks

Alex J. Lee, Joshua A. Rackers, Shivesh Pathak, William P. Bricker

The evolutionary loss of the Eh1 motif in FoxE1 in the lineage of placental mammals

Mahak Sharma, Victoria M. Larow, [ ... ], Sergey Yaklichkin

DNAJB3 attenuates ER stress through direct interaction with AKT

Zeyaul Islam, Abdoulaye Diane, [ ... ], Prasanna R. Kolatkar

Multidimensional scaling methods can reconstruct genomic DNA loops using Hi-C data properties

Ryo Ishibashi

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