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Genomics

Klebsiella virus UPM2146 lyses multiple drug-resistant Klebsiella pneumoniae in vitro and in vivo

Omar Assafiri, Adelene Ai-Lian Song, Geok Hun Tan, Irwan Hanish, Amalia Mohd Hashim, Khatijah Yusoff

published 08 Jan 2021

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Transcriptomic analysis of the honey bee (Apis mellifera) queen spermathecae reveals genes that may be involved in sperm storage after mating

Juliana Rangel, Tonya F. Shepherd, Alejandra N. Gonzalez, Andrew Hillhouse, Kranti Konganti, Nancy H. Ing

published 08 Jan 2021

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New evidence confirming the CD genomic constitutions of the tetraploid Avena species in the section Pachycarpa Baum

Honghai Yan, Zichao Ren, Di Deng, Kehan Yang, Chuang Yang, Pingping Zhou, Charlene P. Wight, Changzhong Ren, Yuanying Peng

published 08 Jan 2021

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Rapid detection of Clostridium perfringens in food by loop-mediated isothermal amplification combined with a lateral flow biosensor

Thanawat Sridapan, Wanida Tangkawsakul, Tavan Janvilisri, Wansika Kiatpathomchai, Sirintip Dangtip, Natharin Ngamwongsatit, Duangjai Nacapricha, Puey Ounjai, Surang Chankhamhaengdecha

published 07 Jan 2021

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Efficient association mapping from k-mers—An application in finding sex-specific sequences

Zakaria Mehrab, Jaiaid Mobin, Ibrahim Asadullah Tahmid, Atif Rahman

published 07 Jan 2021

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Influence of L-lactate and low glucose concentrations on the metabolism and the toxin formation of Clostridioides difficile

Julia Danielle Hofmann, Rebekka Biedendieck, Annika-Marisa Michel, Dietmar Schomburg, Dieter Jahn, Meina Neumann-Schaal

published 07 Jan 2021

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Predicting drug-metagenome interactions: Variation in the microbial β-glucuronidase level in the human gut metagenomes

Moamen M. Elmassry, Sunghwan Kim, Ben Busby

published 07 Jan 2021

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Geography as non-genetic modulation factor of chicken cecal microbiota

Natalia Pin Viso, Enzo Redondo, Juan María Díaz Carrasco, Leandro Redondo, Julia Sabio y. Garcia, Mariano Fernández Miyakawa, Marisa Diana Farber

published 06 Jan 2021

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Characterization of cerebrospinal fluid (CSF) microbiota from patients with CSF shunt infection and reinfection using high throughput sequencing of 16S ribosomal RNAgenes

Kathryn B. Whitlock, Christopher E. Pope, Paul Hodor, Lucas R. Hoffman, David L. Limbrick Jr., Patrick J. McDonald, Jason S. Hauptman, Jeffrey G. Ojemann, Tamara D. Simon, on behalf of the Cerebrospinal FLuId MicroBiota in Shunts Study (CLIMB) Group

published 06 Jan 2021

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Assessment of two DNA extraction kits for profiling poultry respiratory microbiota from multiple sample types

Michael E. C. Abundo, John M. Ngunjiri, Kara J. M. Taylor, Hana Ji, Amir Ghorbani, Mahesh K. C., Bonnie P. Weber, Timothy J. Johnson, Chang-Won Lee

published 06 Jan 2021

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Comprehensive genomic analysis reveals virulence factors and antibiotic resistance genes in Pantoea agglomerans KM1, a potential opportunistic pathogen

Robin B. Guevarra, Stefan Magez, Eveline Peeters, Mi Sook Chung, Kyung Hyun Kim, Magdalena Radwanska

published 06 Jan 2021

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Phylogenetic diversity of 200+ isolates of the ectomycorrhizal fungus Cenococcum geophilum associated with Populus trichocarpa soils in the Pacific Northwest, USA and comparison to globally distributed representatives

Jessica M. Vélez, Reese M. Morris, Rytas Vilgalys, Jessy Labbé, Christopher W. Schadt

published 06 Jan 2021

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Quantile regression in genomic selection for oligogenic traits in autogamous plants: A simulation study

Gabriela França Oliveira, Ana Carolina Campana Nascimento, Moysés Nascimento, Isabela de Castro Sant'Anna, Juan Vicente Romero, Camila Ferreira Azevedo, Leonardo Lopes Bhering, Eveline Teixeira Caixeta Moura

published 05 Jan 2021

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