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Genomics

Horizontal Transfer of a Nitrate Assimilation Gene Cluster and Ecological Transitions in Fungi: A Phylogenetic Study

Jason C. Slot, David S. Hibbett

Significant and Systematic Expression Differentiation in Long-Lived Yeast Strains

Chao Cheng, Paola Fabrizio, [ ... ], Lei M. Li

SiDCoN: A Tool to Aid Scoring of DNA Copy Number Changes in SNP Chip Data

Derek J. Nancarrow, Herlina Y. Handoko, [ ... ], Nicholas K. Hayward

Phylogenetic Analysis of the Neks Reveals Early Diversification of Ciliary-Cell Cycle Kinases

Jeremy D. K. Parker, Brian A. Bradley, Arne O. Mooers, Lynne M. Quarmby

Microarray Analysis in the Archaeon Halobacterium salinarum Strain R1

Jens Twellmeyer, Andy Wende, [ ... ], Dieter Oesterhelt

Cell Cycle Genes Are the Evolutionarily Conserved Targets of the E2F4 Transcription Factor

Caitlin M. Conboy, Christiana Spyrou, [ ... ], Duncan T. Odom

Horizontal Gene Transfer Regulation in Bacteria as a “Spandrel” of DNA Repair Mechanisms

Saliou Fall, Anne Mercier, [ ... ], Pascal Simonet

A Simple Method for Combining Genetic Mapping Data from Multiple Crosses and Experimental Designs

Jeremy L. Peirce, Karl W. Broman, Lu Lu, Robert W. Williams

Demographic Histories of ERV-K in Humans, Chimpanzees and Rhesus Monkeys

Camila M. Romano, Fernando L. de Melo, [ ... ], Paolo M. de A. Zanotto

Nullomers: Really a Matter of Natural Selection?

Claudia Acquisti, George Poste, David Curtiss, Sudhir Kumar

Variable Expression of Cre Recombinase Transgenes Precludes Reliable Prediction of Tissue-Specific Gene Disruption by Tail-Biopsy Genotyping

Tim J. Schulz, Markus Glaubitz, [ ... ], Michael Ristow

Optimality Driven Nearest Centroid Classification from Genomic Data

Alan R. Dabney, John D. Storey

An Improved, Bias-Reduced Probabilistic Functional Gene Network of Baker's Yeast, Saccharomyces cerevisiae

Insuk Lee, Zhihua Li, Edward M. Marcotte

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