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Genomics

Genomic characterization of Comamonas kerstersii isolated from diarrheal patients in Bangladesh

Noshin Ibnat Rib, Fariza Shams, Fahad Khan, Senzuti Sharmin, Sakib Abrar Hossain, Abdus Sadique, Jahidul Alam, Pronoy Debnath, Arman Hossain, Aura Rahman, Syeda Naushin Tabassum, Tahrima Saiha Huq, Muhammad Maqsud Hossain

published 10 Apr 2026

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Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies

Bianca-Maria Cosma, Stephanie Pillay, David Calderón-Franco, Thomas Abeel

published 10 Apr 2026

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Sequencing complete plasmids on Oxford Nanopore Technologies sequencers using R2C2 and Chopper

Kayla D. Schimke, Christopher Vollmers

published 10 Apr 2026

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Genomic dissection of methane emission traits in cattle: A meta-GWAS and heritability analysis across populations

Sare Golpasand, Navid Ghavi Hossein-Zadeh, Shahrokh Ghovvati

published 10 Apr 2026

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Whole genome and phylogenomic insights into Vibrio parahaemolyticus from Pacific White Shrimp reveal resistance and virulence traits in Bangladeshi aquaculture

Md. Habib Ullah Masum, Mohammad Sharif Uddin, Kazi Chamonara, Sumaia Sultana, Sajedul Islam, Afifa Siddiqua

published 09 Apr 2026

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Molecular identification and microbiome profiling of household casebearer, Phereoeca sp. (Lepidoptera: Tineidae) from Malaysia: Potential implications for human skin irritation

Salmah Yaakop, Muhammad Afiq Senen, Nur Alya Adila Rosli, Muhamad Azmi Mohammed

published 09 Apr 2026

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Protocol: A multi-factorial, multi-centre study, for biomarker identification in healthy controls for comparison to babies with moderate-severe NESHIE

Carina C. Babbo, Jeanne van Rensburg, Juanita Mellet, Sithembiso C. Velaphi, Firdose L. Nakwa, Mogomane Y.K. Masemola, Gugulabatembunamahlubi T.J. Kali, Caroline J. Foden, Solize Oosthuizen-Vosloo, Vedarsha Chellan, Odireleng Mosuwe, Priyal Mistry, Ariel R.M. Buyens, Fatima Barmania, Shakti Pillay, Daynia E. Ballot, Melantha Coetzee, Alan R. Horn, Colleen Wright, Pawel T. Schubertand, Michael S. Pepper

published 08 Apr 2026

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FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization

Afnan Faridoun, Ramon Carvalho, Jacob Smith, Andrew Gibb, Lavanya Jain, Annie Zhang, Ajay Sran, Johanna Redmond, Mohammad Zubbair Malik, Monica Gibson, Anum Haider, Umar Rekhi, Anjali Bhagirath, Leigha D. Rock, Khaled Altabtbaei

published 07 Apr 2026

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Leveraging a synthetic biology approach to enhance BCG-mediated expansion of Vγ9Vδ2 T cells

Christine M. Qabar, Allison W. Roberts, Lucas M. Waldburger, Edward E. K. Baidoo, Emine Akyuz Turumtay, Jay D. Keasling, Dan A. Portnoy, Jeffery S. Cox

published 06 Apr 2026

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A genomic locus uniquely encoded by blueberry-infecting Xylella fastidiosa strains affects motility and biofilm formation in vitro, and virulence in planta

Navdeep Kaur, Marcus V. Merfa, Alexandra K. Kahn, Rodrigo P. P. Almeida, Leonardo De La Fuente

published 03 Apr 2026

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Clonal spread of multidrug-resistant Salmonella Kentucky ST198 in poultry market environments in Dhaka city, Bangladesh

Md Abu Sayem Khan, Mahbub Arefin Rafi, Md Azad Hossen, Md. Majibur Rahman, Sabita Rezwana Rahman

published 03 Apr 2026

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GermVarX: A Robust Workflow for Joint Germline Variant Exploration in whole-exome sequencing cohorts

Thao Thi Phuong Nguyen, Dung Duc Nguyen, Thuy Van Mai, Dung Khoi Nguyen, Tung Dang Nguyen, Ngoc Thi Minh Truong, Hanh Hong Ha, Trang Thi Ha Tran

published 02 Apr 2026

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Analysis of morphological, morphokinetics, cell-free DNA, microRNAs parameters to predict aneuploidy status of embryos

Achmad Kemal Harzif, Intan Indah Permatasari, Patricia Alika Kurniawan, Thalia Amila Elsiyana, Fistyanisa Elya Charilda, Azizah Fitriayu Andyra, Heidi Dewi Mutia, Nafi’atul Ummah, Putri Nurbaeti, Amalia Shadrina, Pritta Ameilia Iffanolida, Kresna Mutia, Ririn Rahmala Febri, Retno Asti Werdhani, Dwi Anita Suryandari, Wisnu Jatmiko, Arief Boediono, Hartanto Bayuaji, R. Muharam Natadisastra, Budi Wiweko

published 02 Apr 2026

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