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Gene regulatory networks

Identification of empagliflozin-related hub genes in atherosclerosis and their correlations with immune infiltration: Network pharmacology and bioinformatics analyses

Yicheng Rong, Xinyu Liu, [ ... ], Liming Chen

Identification of key genes associated with idiopathic pulmonary fibrosis and sarcopenia by bioinformatics analysis

Lanying Shen, Zihan Yi, [ ... ], Yue Hu

Weighted gene co-expression network analysis identifies functional modules related to bovine respiratory disease

Nooshin Ghahramani, Ali Hashemi, Bahman Panahi

Network-based multi-class classifier to identify optimized gene networks for acute leukemia cell line classification

Heewon Park, Satoru Miyano

In silico screening system based on a transcription factors regulatory network only using transcriptomic data

Tadaaki Nakajima, Kentaro Harada, Yasuhiro Tomooka, Tomomi Sato

Computational network biology analysis revealed COVID-19 severity markers: Molecular interplay between HLA-II with CIITA

Heewon Park, Satoru Miyano

Role of tristability in the robustness of the differentiation mechanism

Corentin Robert, Francisco Prista von Bonhorst, [ ... ], Yannick De Decker

Analysis of cellular senescence-related genes in calcified aortic valve disease and the potential therapeutic role of β-Carotene

Yijing Tao, Chengjie Gao, [ ... ], Qianwen Yao

Set stability and synchronization of generalized asynchronous probabilistic Boolean networks with impulsive effects

Fukun Liu, Yujie Sun, [ ... ], Hao Zhang

Covariate-adjusted construction of gene regulatory networks using a combination of generalized linear model and penalized maximum likelihood

Omid Chatrabgoun, Alireza Daneshkhah, [ ... ], Ali Kashif Bashir

The ameliorative effect of pioglitazone against colistin-induced nephrotoxicity is mediated by inhibition of NF-κB and restoration of Nrf2 signaling: An integrative bioinformatics prediction-guided in vitro study

Metab Alharbi, Mohamed A. Mahmoud, [ ... ], Abdullah F. Alasmari

Global transcriptome analysis identifies critical functional modules associated with multiple abiotic stress responses in microalgae Chromochloris zofingiensis

Bahman Panahi

Sparse spectral graph analysis and its application to gastric cancer drug resistance-specific molecular interplays identification

Heewon Park, Satoru Miyano

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