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Gene regulatory networks

Identification and diagnostic potential of pyroptosis-related genes in endometriosis: A novel bioinformatics analysis and validation

Li Wang, Piaopiao Teng, Jiawen Chen, Caiyun Ding, Xianchen Luo, Chang Su, Guantai Ni, Yuanyuan Lyu, Jin Ding

published 09 Jun 2026

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Transcriptome sequencing combined with experimental verification to explore potential key genes related to uric acid in diabetic retinopathy

Haiming Liang, Tianqi Yang, Feina Lu, Lixia Lin, Hao Liang

published 02 Jun 2026

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A pyroptosis-related gene signature for the diagnosis of acute pancreatitis

Yuting Wang, Jun Li, Zhongsu Yu, Shuyuan Li, Yuxia Chen, Yun Pan, Liangping Cheng, Guangyuan Yu

published 17 Apr 2026

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Network-constrained Random Lasso for biologically interpretable gene network inference across unequal sample sizes

Heewon Park, Satoru Miyano

published 31 Mar 2026

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Identification of empagliflozin-related hub genes in atherosclerosis and their correlations with immune infiltration: Network pharmacology and bioinformatics analyses

Yicheng Rong, Xinyu Liu, Yuanyuan Sun, Le Yang, Liming Chen

published 16 Jan 2026

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Identification of key genes associated with idiopathic pulmonary fibrosis and sarcopenia by bioinformatics analysis

Lanying Shen, Zihan Yi, Jiahao Liu, Yinghua Ying, Yue Hu

published 01 Dec 2025

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Weighted gene co-expression network analysis identifies functional modules related to bovine respiratory disease

Nooshin Ghahramani, Ali Hashemi, Bahman Panahi

published 27 Oct 2025

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Network-based multi-class classifier to identify optimized gene networks for acute leukemia cell line classification

Heewon Park, Satoru Miyano

published 08 May 2025

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In silico screening system based on a transcription factors regulatory network only using transcriptomic data

Tadaaki Nakajima, Kentaro Harada, Yasuhiro Tomooka, Tomomi Sato

published 07 Apr 2025

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Computational network biology analysis revealed COVID-19 severity markers: Molecular interplay between HLA-II with CIITA

Heewon Park, Satoru Miyano

published 31 Mar 2025

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Role of tristability in the robustness of the differentiation mechanism

Corentin Robert, Francisco Prista von Bonhorst, Geneviève Dupont, Didier Gonze, Yannick De Decker

published 19 Mar 2025

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Analysis of cellular senescence-related genes in calcified aortic valve disease and the potential therapeutic role of β-Carotene

Yijing Tao, Chengjie Gao, Juan Wang, Qiyin Zhang, Zhisong Wang, Leng Han, Donglai Cao, Qianwen Yao

published 10 Mar 2025

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Set stability and synchronization of generalized asynchronous probabilistic Boolean networks with impulsive effects

Fukun Liu, Yujie Sun, Chuan Zhang, Lunshi Xu, Hao Zhang

published 12 Feb 2025

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