The translesion DNA polymerases Pol ζ and Rev1 are activated independently of PCNA ubiquitination upon UV radiation in mutants of DNA polymerase δ

Carine Tellier-Lebegue, Eléa Dizet, Emilie Ma, Xavier Veaute, Eric Coïc, Jean-Baptiste Charbonnier, Laurent Maloisel

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007119

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1. Correction: The translesion DNA polymerases Pol ζ and Rev1 are activated independently of PCNA ubiquitination upon UV radiation in mutants of DNA polymerase δ

Cell envelope stress in mycobacteria is regulated by the novel signal transduction ATPase IniR in response to trehalose

Maikel Boot, Vincent J. C. van Winden, Marion Sparrius, Robert van de Weerd, Alexander Speer, Roy Ummels, Tige Rustad, David R. Sherman, Wilbert Bitter

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007131

Optical silencing of body wall muscles induces pumping inhibition in Caenorhabditis elegans

Megumi Takahashi, Shin Takagi

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007134

The Smc5/6 complex regulates the yeast Mph1 helicase at RNA-DNA hybrid-mediated DNA damage

Juan Lafuente-Barquero, Sarah Luke-Glaser, Marco Graf, Sonia Silva, Belén Gómez-González, Arianna Lockhart, Michael Lisby, Andrés Aguilera, Brian Luke

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007136

Integrated rare variant-based risk gene prioritization in disease case-control sequencing studies

Jhih-Rong Lin, Quanwei Zhang, Ying Cai, Bernice E. Morrow, Zhengdong D. Zhang

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007142

An essential regulatory function of the DnaK chaperone dictates the decision between proliferation and maintenance in Caulobacter crescentus

Frederic D. Schramm, Kristina Heinrich, Marietta Thüring, Jörg Bernhardt, Kristina Jonas

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007148

Loss-of-function of the ciliopathy protein Cc2d2a disorganizes the vesicle fusion machinery at the periciliary membrane and indirectly affects Rab8-trafficking in zebrafish photoreceptors

Irene Ojeda Naharros, Matthias Gesemann, José M. Mateos, Gery Barmettler, Austin Forbes, Urs Ziegler, Stephan C. F. Neuhauss, Ruxandra Bachmann-Gagescu

PLOS Genetics: published December 27, 2017 | https://doi.org/10.1371/journal.pgen.1007150

Parallel evolution of the POQR prolyl oligo peptidase gene conferring plant quantitative disease resistance

Thomas Badet, Derry Voisin, Malick Mbengue, Marielle Barascud, Justine Sucher, Pierre Sadon, Claudine Balagué, Dominique Roby, Sylvain Raffaele

PLOS Genetics: published December 22, 2017 | https://doi.org/10.1371/journal.pgen.1007143

FOXM1 activates AGR2 and causes progression of lung adenomas into invasive mucinous adenocarcinomas

David Milewski, David Balli, Vladimir Ustiyan, Tien Le, Hendrik Dienemann, Arne Warth, Kai Breuhahn, Jeffrey A. Whitsett, Vladimir V. Kalinichenko, Tanya V. Kalin

PLOS Genetics: published December 21, 2017 | https://doi.org/10.1371/journal.pgen.1007097

Binding of high mobility group A proteins to the mammalian genome occurs as a function of AT-content

Daniele F Colombo, Lukas Burger, Tuncay Baubec, Dirk Schübeler

PLOS Genetics: published December 21, 2017 | https://doi.org/10.1371/journal.pgen.1007102

Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish

Napo K. M. Cheung, Ryohei Nakamura, Ayako Uno, Masahiko Kumagai, Hiroto S. Fukushima, Shinichi Morishita, Hiroyuki Takeda

PLOS Genetics: published December 21, 2017 | https://doi.org/10.1371/journal.pgen.1007123

Regulation of the cohesin-loading factor NIPBL: Role of the lncRNA NIPBL-AS1 and identification of a distal enhancer element

Jessica Zuin, Valentina Casa, Jelena Pozojevic, Petros Kolovos, Mirjam C. G. N. van den Hout, Wilfred F. J. van Ijcken, Ilaria Parenti, Diana Braunholz, Yorann Baron, Erwan Watrin, Frank J. Kaiser, Kerstin S. Wendt

PLOS Genetics: published December 20, 2017 | https://doi.org/10.1371/journal.pgen.1007137

A conserved maternal-specific repressive domain in Zelda revealed by Cas9-mediated mutagenesis in Drosophila melanogaster

Danielle C. Hamm, Elizabeth D. Larson, Markus Nevil, Kelsey E. Marshall, Eliana R. Bondra, Melissa M. Harrison

PLOS Genetics: published December 19, 2017 | https://doi.org/10.1371/journal.pgen.1007120

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Background sequence characteristics influence the occurrence and severity of disease-causing mtDNA mutations

Wei Wei, Aurora Gomez-Duran, Gavin Hudson, Patrick F. Chinnery

PLOS Genetics: published December 18, 2017 | https://doi.org/10.1371/journal.pgen.1007126

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Leaf shedding as an anti-bacterial defense in Arabidopsis cauline leaves

O. Rahul Patharkar, Walter Gassmann, John C. Walker

PLOS Genetics: published December 18, 2017 | https://doi.org/10.1371/journal.pgen.1007132

Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations

Nela Nikolic, Frank Schreiber, Alma Dal Co, Daniel J. Kiviet, Tobias Bergmiller, Sten Littmann, Marcel M. M. Kuypers, Martin Ackermann

PLOS Genetics: published December 18, 2017 | https://doi.org/10.1371/journal.pgen.1007122

Conditional knockout mice for the distal appendage protein CEP164 reveal its essential roles in airway multiciliated cell differentiation

Saul S. Siller, Himanshu Sharma, Shuai Li, June Yang, Yong Zhang, Michael J. Holtzman, Wipawee Winuthayanon, Holly Colognato, Bernadette C. Holdener, Feng-Qian Li, Ken-Ichi Takemaru

PLOS Genetics: published December 15, 2017 | https://doi.org/10.1371/journal.pgen.1007128

Selection for long and short sleep duration in Drosophila melanogaster reveals the complex genetic network underlying natural variation in sleep

Susan T. Harbison, Yazmin L. Serrano Negron, Nancy F. Hansen, Amanda S. Lobell

PLOS Genetics: published December 14, 2017 | https://doi.org/10.1371/journal.pgen.1007098

MITF – A controls branching morphogenesis and nephron endowment

Aurélie Phelep, Denise Laouari, Kapil Bharti, Martine Burtin, Salvina Tammaccaro, Serge Garbay, Clément Nguyen, Florence Vasseur, Thomas Blanc, Sophie Berissi, Francina Langa-Vives, Evelyne Fischer, Anne Druilhe, Heinz Arnheiter, Gerard Friedlander, Marco Pontoglio, Fabiola Terzi

PLOS Genetics: published December 14, 2017 | https://doi.org/10.1371/journal.pgen.1007093

ciRS-7 exonic sequence is embedded in a long non-coding RNA locus

Steven P. Barrett, Kevin R. Parker, Caroline Horn, Miguel Mata, Julia Salzman

PLOS Genetics: published December 13, 2017 | https://doi.org/10.1371/journal.pgen.1007114

Adipose tissue deficiency of hormone-sensitive lipase causes fatty liver in mice

Bo Xia, Guo He Cai, Hao Yang, Shu Pei Wang, Grant A. Mitchell, Jiang Wei Wu

PLOS Genetics: published December 12, 2017 | https://doi.org/10.1371/journal.pgen.1007110

Host factors that promote retrotransposon integration are similar in distantly related eukaryotes

Sudhir Kumar Rai, Maya Sangesland, Michael Lee Jr., Caroline Esnault, Yujin Cui, Atreyi Ghatak Chatterjee, Henry L. Levin

PLOS Genetics: published December 12, 2017 | https://doi.org/10.1371/journal.pgen.1006775

An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress

Yingfang Zhu, Bangshing Wang, Kai Tang, Chuan-Chih Hsu, Shaojun Xie, Hai Du, Yuting Yang, Weiguo Andy Tao, Jian-Kang Zhu

PLOS Genetics: published December 12, 2017 | https://doi.org/10.1371/journal.pgen.1007124

SYGL-1 and LST-1 link niche signaling to PUF RNA repression for stem cell maintenance in Caenorhabditis elegans

Heaji Shin, Kimberly A. Haupt, Aaron M. Kershner, Peggy Kroll-Conner, Marvin Wickens, Judith Kimble

PLOS Genetics: published December 12, 2017 | https://doi.org/10.1371/journal.pgen.1007121

A MIG-15/JNK-1 MAP kinase cascade opposes RPM-1 signaling in synapse formation and learning

Oliver Crawley, Andrew C. Giles, Muriel Desbois, Sudhanva Kashyap, Rayna Birnbaum, Brock Grill

PLOS Genetics: published December 11, 2017 | https://doi.org/10.1371/journal.pgen.1007095

In vivo zebrafish morphogenesis shows Cyp26b1 promotes tendon condensation and musculoskeletal patterning in the embryonic jaw

Patrick D. McGurk, Mary E. Swartz, Jessica W. Chen, Jenna L. Galloway, Johann K. Eberhart

PLOS Genetics: published December 11, 2017 | https://doi.org/10.1371/journal.pgen.1007112

The pea branching RMS2 gene encodes the PsAFB4/5 auxin receptor and is involved in an auxin-strigolactone regulation loop

Yasmine Ligerot, Alexandre de Saint Germain, Tanya Waldie, Christelle Troadec, Sylvie Citerne, Nikita Kadakia, Jean-Paul Pillot, Michael Prigge, Grégoire Aubert, Abdelhafid Bendahmane, Ottoline Leyser, Mark Estelle, Frédéric Debellé, Catherine Rameau

PLOS Genetics: published December 8, 2017 | https://doi.org/10.1371/journal.pgen.1007089

Development of a tissue-specific ribosome profiling approach in Drosophila enables genome-wide evaluation of translational adaptations

Xun Chen, Dion Dickman

PLOS Genetics: published December 1, 2017 | https://doi.org/10.1371/journal.pgen.1007117

Deep Reads: How I learnt to love population genetics

Jonathan Flint

PLOS Genetics: published December 21, 2017 | https://doi.org/10.1371/journal.pgen.1007140