VASCilia is an open-source, deep learning-based tool for 3D analysis of cochlear hair cell stereocilia bundles

• Yasmin M. Kassim ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: ykassim@ucsd.edu (YMK); u1manor@ucsd.edu (UM)

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

  https://orcid.org/0000-0001-5339-8081

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• David B. Rosenberg,

  Roles Data curation, Methodology, Validation

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

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• Samprita Das,

  Roles Data curation, Validation, Visualization

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

  https://orcid.org/0009-0009-4321-0677

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• Xiaobo Wang,

  Roles Data curation, Methodology, Resources

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

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• Zhuoling Huang,

  Roles Data curation, Validation, Visualization

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

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• Samia Rahman,

  Roles Data curation, Visualization

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

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• Ibraheem M. Al Shammaa,

  Roles Data curation, Visualization

  Affiliation Department of Cellular and Molecular Biology, University of California, Berkeley, California, United States of America

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• Samer Salim,

  Roles Data curation, Visualization

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

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• Kevin Huang,

  Roles Data curation, Visualization

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

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• Alma Renero,

  Roles Data curation, Validation, Visualization

  Affiliation Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America

  https://orcid.org/0009-0006-7874-7958

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• Yuzuru Ninoyu,

  Roles Data curation, Methodology, Visualization

  Affiliations Department of Otolaryngology, University of California, San Diego, La Jolla, California, United States of America, Department of Otolaryngology, Kyoto Prefectural University of Medicine, Kyoto, Japan

  https://orcid.org/0000-0002-9407-4697

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• Rick A. Friedman,

  Roles Funding acquisition, Resources, Supervision

  Affiliation Department of Otolaryngology, University of California, San Diego, La Jolla, California, United States of America

  https://orcid.org/0000-0002-5490-8562

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• Artur A. Indzhykulian,

  Roles Data curation, Resources, Validation

  Affiliation Department of Otolaryngology, Harvard Medical School and Massachusetts Eye and Ear, Boston, Massachusetts, United States of America

  https://orcid.org/0000-0002-2076-6818

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• Uri Manor

  Roles Conceptualization, Funding acquisition, Investigation, Project administration, Resources, Supervision, Validation, Writing – review & editing

  * E-mail: ykassim@ucsd.edu (YMK); u1manor@ucsd.edu (UM)

  Affiliations Department of Cell & Developmental Biology, University of California San Diego, La Jolla, California, United States of America, Department of Otolaryngology, University of California, San Diego, La Jolla, California, United States of America, Halıcıoğlu Data Science Institute, University of California, San Diego, La Jolla, California, United States of America

  https://orcid.org/0000-0002-9802-1955

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