Comprehensive blueprint of Salmonella genomic plasticity identifies hotspots for pathogenicity genes

Simran Krishnakant Kushwaha; Yi Wu; Hugo Leonardo Avila; Abhirath Anand; Thomas Sicheritz-Pontén; Andrew Millard; Sandhya Amol Marathe; Franklin L. Nobrega

doi:10.1371/journal.pbio.3002746

Loading metrics

Open Access

Peer-reviewed

Research Article

Comprehensive blueprint of Salmonella genomic plasticity identifies hotspots for pathogenicity genes

Simran Krishnakant Kushwaha,

Roles Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliations Department of Biological Sciences, Birla Institute of Technology & Science (BITS), Pilani, Rajasthan, India, School of Biological Sciences, University of Southampton, Southampton, United Kingdom
⨯
Yi Wu,

Roles Investigation, Software, Writing – review & editing

Affiliation School of Biological Sciences, University of Southampton, Southampton, United Kingdom
⨯
Hugo Leonardo Avila,

Roles Investigation, Software, Writing – review & editing

Affiliation Laboratory for Applied Science and Technology in Health, Instituto Carlos Chagas, FIOCRUZ Paraná, Brazil
⨯
Abhirath Anand,

Roles Investigation, Software, Writing – review & editing

Affiliation Department of Computer Sciences and Information Systems, Birla Institute of Technology & Science (BITS), Pilani, Rajasthan, India
⨯
Thomas Sicheritz-Pontén,

Roles Software, Writing – review & editing

Affiliations Center for Evolutionary Hologenomics, Globe Institute, University of Copenhagen, Copenhagen, Denmark, Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), AIMST University, Bedong, Kedah, Malaysia
⨯
Andrew Millard,

Roles Formal analysis, Investigation, Writing – review & editing

Affiliation Centre for Phage Research, Department of Genetics and Genome Biology, University of Leicester, Leicester, United Kingdom
⨯
Sandhya Amol Marathe,

Roles Formal analysis, Writing – review & editing

Affiliation Department of Biological Sciences, Birla Institute of Technology & Science (BITS), Pilani, Rajasthan, India
⨯
Franklin L. Nobrega

Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

* E-mail: F.Nobrega@soton.ac.uk

Affiliation School of Biological Sciences, University of Southampton, Southampton, United Kingdom

https://orcid.org/0000-0002-8238-1083

⨯

Comprehensive blueprint of Salmonella genomic plasticity identifies hotspots for pathogenicity genes

Simran Krishnakant Kushwaha,
Yi Wu,
Hugo Leonardo Avila,
Abhirath Anand,
Thomas Sicheritz-Pontén,
Andrew Millard,
Sandhya Amol Marathe,
Franklin L. Nobrega

Published: August 7, 2024
https://doi.org/10.1371/journal.pbio.3002746

Reader Comments (0)

Post a new comment on this article

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Salmonella
Is the Subject Area "Salmonella" applicable to this article?

Thanks for your feedback.
Antibiotic resistance
Is the Subject Area "Antibiotic resistance" applicable to this article?

Thanks for your feedback.
Fish genomics
Is the Subject Area "Fish genomics" applicable to this article?

Thanks for your feedback.
Salmonella enterica
Is the Subject Area "Salmonella enterica" applicable to this article?

Thanks for your feedback.
Virulence factors
Is the Subject Area "Virulence factors" applicable to this article?

Thanks for your feedback.
Pathogenesis
Is the Subject Area "Pathogenesis" applicable to this article?

Thanks for your feedback.
Bacterial genomics
Is the Subject Area "Bacterial genomics" applicable to this article?

Thanks for your feedback.
Plasmids
Is the Subject Area "Plasmids" applicable to this article?

Thanks for your feedback.