The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulence

• Ersin Gül,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

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• Erik Bakkeren,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland, Department of Biology, University of Oxford, Oxford, United Kingdom, Department of Biochemistry, University of Oxford, Oxford, United Kingdom

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• Guillem Salazar,

  Roles Investigation, Methodology, Validation, Writing – review & editing

  Affiliations Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland, Institute of Microbiology and Swiss Institute of Bioinformatics, Department of Biology, ETH Zürich, Zürich, Switzerland

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• Yves Steiger,

  Roles Investigation, Methodology

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

  ⨯
• Andrew Abi Younes,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

  ⨯
• Melanie Clerc,

  Roles Methodology, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

  ⨯
• Philipp Christen,

  Roles Methodology, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

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• Stefan A. Fattinger,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliations Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland, Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden

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• Bidong D. Nguyen,

  Roles Methodology, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

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• Patrick Kiefer,

  Roles Methodology, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

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• Emma Slack,

  Roles Methodology, Writing – review & editing

  Affiliations Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland, Institute for Food, Nutrition and Health, ETH Zürich, Zürich, Switzerland

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• Martin Ackermann,

  Roles Writing – review & editing

  Affiliations Institute of Biogeochemistry and Pollutant Dynamics, Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland, Department of Environmental Microbiology, Eawag, Duebendorf, Switzerland

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• Julia A. Vorholt,

  Roles Investigation, Supervision, Writing – review & editing

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

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• Shinichi Sunagawa,

  Roles Investigation, Supervision, Writing – review & editing

  Affiliations Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland, Institute of Microbiology and Swiss Institute of Bioinformatics, Department of Biology, ETH Zürich, Zürich, Switzerland

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• Médéric Diard,

  Roles Investigation, Writing – review & editing

  Affiliations Biozentrum, University of Basel, Basel, Switzerland, Botnar Research Centre for Child Health, Basel, Switzerland

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•  [ ... ],
• Wolf-Dietrich Hardt

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: hardt@micro.biol.ethz.ch

  Affiliation Institute of Microbiology, Department of Biology, ETH Zurich, Zurich, Switzerland

  https://orcid.org/0000-0002-9892-6420

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