iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria

• Simon Roux ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: sroux@lbl.gov

  Affiliation DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

  https://orcid.org/0000-0002-5831-5895

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• Antonio Pedro Camargo,

  Roles Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Felipe H. Coutinho,

  Roles Formal analysis, Software, Validation, Writing – original draft, Writing – review & editing

  Affiliation Instituto de Ciencias del Mar (ICM-CSIC), Barcelona, Spain

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• Shareef M. Dabdoub,

  Roles Data curation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Division of Biostatistics and Computational Biology, University of Iowa College of Dentistry, Iowa City, Iowa, United States of America

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• Bas E. Dutilh,

  Roles Formal analysis, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Institute of Biodiversity, Faculty of Biological Sciences, Cluster of Excellence Balance of the Microverse, Friedrich Schiller University, Jena, Germany, Theoretical Biology and Bioinformatics, Science for Life, Utrecht University, Utrecht, the Netherlands

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• Stephen Nayfach,

  Roles Formal analysis, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Andrew Tritt

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Writing – original draft, Writing – review & editing

  Affiliation Applied Mathematics and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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