Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites

• Michael J. Boucher,

  Roles Conceptualization, Investigation, Writing – original draft, Writing – review & editing

  Affiliations Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America, Department of Biochemistry, Stanford University School of Medicine, Stanford, California, United States of America

  http://orcid.org/0000-0001-5725-7219

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• Sreejoyee Ghosh,

  Roles Investigation, Writing – review & editing

  Affiliation Department of Biochemistry, Stanford University School of Medicine, Stanford, California, United States of America

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• Lichao Zhang,

  Roles Resources, Writing – review & editing

  Affiliation Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California, United States of America

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• Avantika Lal ,

  Contributed equally to this work with: Avantika Lal, Se Won Jang

  Roles Software, Writing – review & editing

  Affiliation Department of Pathology, Stanford University School of Medicine, Stanford, California, United States of America

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• Se Won Jang ,

  Contributed equally to this work with: Avantika Lal, Se Won Jang

  Roles Software, Writing – review & editing

  Affiliation Department of Computer Science, Stanford University, Stanford, California, United States of America

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• An Ju ,

  Roles Software, Writing – review & editing

  ¶‡ These authors also contributed equally to this work.

  Affiliation Department of Bioengineering, Stanford University, Stanford, California, United States of America

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• Shuying Zhang ,

  Roles Software, Writing – review & editing

  ¶‡ These authors also contributed equally to this work.

  Affiliation Department of Bioengineering, Stanford University, Stanford, California, United States of America

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• Xinzi Wang ,

  Roles Software, Writing – review & editing

  ¶‡ These authors also contributed equally to this work.

  Affiliation Department of Bioengineering, Stanford University, Stanford, California, United States of America

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• Stuart A. Ralph,

  Roles Funding acquisition, Resources, Software, Writing – review & editing

  Affiliation Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Vic, Australia

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• James Zou,

  Roles Funding acquisition, Software, Supervision, Writing – review & editing

  Affiliations Department of Biomedical Data Science, Stanford University School of Medicine, Stanford, California, United States of America, Chan Zuckerberg Biohub, San Francisco, California, United States of America

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• Joshua E. Elias,

  Roles Funding acquisition, Resources, Supervision, Writing – review & editing

  Affiliation Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, California, United States of America

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• Ellen Yeh

  Roles Conceptualization, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: ellenyeh@stanford.edu

  Affiliations Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America, Department of Biochemistry, Stanford University School of Medicine, Stanford, California, United States of America, Department of Pathology, Stanford University School of Medicine, Stanford, California, United States of America, Chan Zuckerberg Biohub, San Francisco, California, United States of America

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