Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins

• Raffi Tonikian ,

  Contributed equally to this work with: Raffi Tonikian, Xiaofeng Xin, Christopher P. Toret

  Affiliations Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada

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• Xiaofeng Xin ,

  Contributed equally to this work with: Raffi Tonikian, Xiaofeng Xin, Christopher P. Toret

  Affiliations Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada

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• Christopher P. Toret ,

  Contributed equally to this work with: Raffi Tonikian, Xiaofeng Xin, Christopher P. Toret

  Current address: Department of Biological Sciences, Stanford University, Stanford, California, United States of America

  Affiliation Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California, United States of America

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• David Gfeller,

  Affiliations Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada

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• Christiane Landgraf,

  Affiliation Institute of Medical Immunology, Charité-Universitätsmedizin Berlin, Berlin, Germany

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• Simona Panni,

  Affiliations Department of Biology, University of Rome Tor Vergata, Rome, Italy, Department of Cell Biology, University of Calabria, Rende, Italy

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• Serena Paoluzi,

  Affiliation Department of Biology, University of Rome Tor Vergata, Rome, Italy

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• Luisa Castagnoli,

  Affiliation Department of Biology, University of Rome Tor Vergata, Rome, Italy

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• Bridget Currell,

  Affiliation Department of Molecular Biology, Genentech, South San Francisco, California, United States of America

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• Somasekar Seshagiri,

  Affiliation Department of Molecular Biology, Genentech, South San Francisco, California, United States of America

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• Haiyuan Yu,

  Affiliation Center for Cancer Systems Biology (CCSB), Department of Cancer Biology, Dana-Farber Cancer Institute and Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America

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• Barbara Winsor,

  Affiliation CNRS et Université de Strasbourg UMR7156, Génétique moléculaire, Génomique et Microbiologie, Strasbourg, France

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• Marc Vidal,

  Affiliation Center for Cancer Systems Biology (CCSB), Department of Cancer Biology, Dana-Farber Cancer Institute and Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America

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• Mark B. Gerstein,

  Affiliations Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, United States of America, Program in Computational Biology and Bioinformatics, Yale University, New Haven, Connecticut, United States of America, Department of Computer Science, Yale University, New Haven, Connecticut, United States of America

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• Gary D. Bader,

  Affiliations Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada

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• Rudolf Volkmer ,

  * E-mail: rve@charite.de (RV); cesareni@uniroma2.it (GC); drubin@berkeley.edu (DGD); pi@kimlab.org (PMK); sachdev.sidhu@utoronto.ca (SSS); charlie.boone@utoronto.ca (CB)

  Affiliation Institute of Medical Immunology, Charité-Universitätsmedizin Berlin, Berlin, Germany

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• Gianni Cesareni ,

  * E-mail: rve@charite.de (RV); cesareni@uniroma2.it (GC); drubin@berkeley.edu (DGD); pi@kimlab.org (PMK); sachdev.sidhu@utoronto.ca (SSS); charlie.boone@utoronto.ca (CB)

  Affiliations Department of Biology, University of Rome Tor Vergata, Rome, Italy, Research Institute “Fondazione Santa Lucia”, Rome, Italy

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• David G. Drubin ,

  * E-mail: rve@charite.de (RV); cesareni@uniroma2.it (GC); drubin@berkeley.edu (DGD); pi@kimlab.org (PMK); sachdev.sidhu@utoronto.ca (SSS); charlie.boone@utoronto.ca (CB)

  Affiliation Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California, United States of America

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• Philip M. Kim ,

  * E-mail: rve@charite.de (RV); cesareni@uniroma2.it (GC); drubin@berkeley.edu (DGD); pi@kimlab.org (PMK); sachdev.sidhu@utoronto.ca (SSS); charlie.boone@utoronto.ca (CB)

  Current address: Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada

  Affiliation Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, United States of America

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• Sachdev S. Sidhu ,

  * E-mail: rve@charite.de (RV); cesareni@uniroma2.it (GC); drubin@berkeley.edu (DGD); pi@kimlab.org (PMK); sachdev.sidhu@utoronto.ca (SSS); charlie.boone@utoronto.ca (CB)

  Current address: Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada

  Affiliation Department of Protein Engineering, Genentech, South San Francisco, California, United States of America

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•  [ ... ],
• Charles Boone

  * E-mail: rve@charite.de (RV); cesareni@uniroma2.it (GC); drubin@berkeley.edu (DGD); pi@kimlab.org (PMK); sachdev.sidhu@utoronto.ca (SSS); charlie.boone@utoronto.ca (CB)

  Affiliations Terrence Donnelly Center for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario, Canada, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada

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