Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm

• Xiao-yong Li ,

  Contributed equally to this work with: Xiao-yong Li, Stewart MacArthur

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Stewart MacArthur ,

  Contributed equally to this work with: Xiao-yong Li, Stewart MacArthur

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Richard Bourgon,

  Current address: EMBL-EBI, Hinxton, Cambridgeshire, United Kingdom

  Affiliation Statistics Department, University of California Berkeley, Berkeley, California, United States of America

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• David Nix,

  Current address: Huntsman Cancer Institute, University of Utah, Salt Lake City, Utah, United States of America

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Daniel A Pollard,

  Affiliation Biophysics Graduate Group, University of California Berkeley, Berkeley, California, United States of America

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• Venky N Iyer,

  Affiliation Department of Molecular and Cell Biology, University of California Berkeley, Berkeley, California, United States of America

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• Aaron Hechmer,

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Lisa Simirenko,

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Mark Stapleton,

  Affiliation Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Cris L. Luengo Hendriks,

  Affiliation Biophysics Graduate Group, University of California Berkeley, Berkeley, California, United States of America

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• Hou Cheng Chu,

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Nobuo Ogawa,

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• William Inwood,

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Victor Sementchenko,

  Affiliation Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Amy Beaton,

  Affiliation Biophysics Graduate Group, University of California Berkeley, Berkeley, California, United States of America

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• Richard Weiszmann,

  Affiliation Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Susan E Celniker,

  Affiliation Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• David W Knowles,

  Affiliation Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• Tom Gingeras,

  Affiliation Affymetrix, Inc., Santa Clara, California, United States of America

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• Terence P Speed,

  Affiliation Statistics Department, University of California Berkeley, Berkeley, California, United States of America

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• Michael B Eisen ,

  *To whom correspondence should be addressed. E-mail: mbeisen@lbl.gov (MBE); mdbiggin@lbl.gov (MDB)

  ¶These authors are joint senior authors on this work.

  Affiliations Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America , Department of Molecular and Cell Biology, University of California Berkeley, Berkeley, California, United States of America , Center for Integrative Genomics, University of California Berkeley, Berkeley, California, United States of America , California Institute for Quantitative Biosciences, Berkeley, California, United States of America

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•  [ ... ],
• Mark D Biggin

  *To whom correspondence should be addressed. E-mail: mbeisen@lbl.gov (MBE); mdbiggin@lbl.gov (MDB)

  ¶These authors are joint senior authors on this work.

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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