Population Genomics: Whole-Genome Analysis of Polymorphism and Divergence in Drosophila simulans

• David J Begun ,

  *To whom correspondence should be addressed. E-mail: djbegun@ucdavis.edu (DJB); akholloway@ucdavis.edu (AKH); chlangley@ucdavis.edu (CHL)

  Affiliations Department of Evolution and Ecology, University of California Davis, Davis, California, United States of America , Center for Population Biology, University of California Davis, Davis, California, United States of America

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• Alisha K Holloway ,

  *To whom correspondence should be addressed. E-mail: djbegun@ucdavis.edu (DJB); akholloway@ucdavis.edu (AKH); chlangley@ucdavis.edu (CHL)

  Affiliations Department of Evolution and Ecology, University of California Davis, Davis, California, United States of America , Center for Population Biology, University of California Davis, Davis, California, United States of America

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• Kristian Stevens,

  Affiliations Department of Evolution and Ecology, University of California Davis, Davis, California, United States of America , Center for Population Biology, University of California Davis, Davis, California, United States of America

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• LaDeana W Hillier,

  Affiliation Genome Sequencing Center, Washington University School of Medicine, St. Louis, Missouri, United States of America

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• Yu-Ping Poh,

  Affiliations Department of Evolution and Ecology, University of California Davis, Davis, California, United States of America , Center for Population Biology, University of California Davis, Davis, California, United States of America , Institute of Molecular and Cellular Biology, National Tsing Hua University, Hsinchu, Taiwan Authority , Research Center for Biodiversity, Academica Sinica, Taipei, Taiwan Authority

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• Matthew W Hahn,

  Affiliations Department of Biology, Indiana University, Bloomington, Indiana, United States of America , School of Informatics, Indiana University, Bloomington, Indiana, United States of America

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• Phillip M Nista,

  Affiliation Department of Biology, Indiana University, Bloomington, Indiana, United States of America

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• Corbin D Jones,

  Affiliations Department of Biology, University of North Carolina, Chapel Hill, North Carolina, United States of America , Carolina Center for Genome Sciences, University of North Carolina, Chapel Hill, North Carolina, United States of America

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• Andrew D Kern,

  Affiliations Department of Evolution and Ecology, University of California Davis, Davis, California, United States of America , Center for Population Biology, University of California Davis, Davis, California, United States of America , Center for Biomolecular Science and Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America

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• Colin N Dewey,

  Affiliation Department of Biostatistics and Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America

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• Lior Pachter,

  Affiliations Department of Mathematics, University of California, Berkeley, California, United States of America , Department of Computer Science, University of California, Berkeley, California, United States of America

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• Eugene Myers,

  Affiliation Department of Computer Science, University of California, Berkeley, California, United States of America

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• Charles H Langley

  *To whom correspondence should be addressed. E-mail: djbegun@ucdavis.edu (DJB); akholloway@ucdavis.edu (AKH); chlangley@ucdavis.edu (CHL)

  Affiliations Department of Evolution and Ecology, University of California Davis, Davis, California, United States of America , Center for Population Biology, University of California Davis, Davis, California, United States of America

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