About the Authors

Connie Fung

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

Affiliation Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America

Shumin Tan

Roles Funding acquisition, Methodology, Resources, Writing – review & editing

Affiliation Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, Massachusetts, United States of America

Mifuyu Nakajima

Roles Formal analysis, Resources, Software, Writing – review & editing

Affiliation Department of Biology, Stanford University, Stanford, California, United States of America

Emma C. Skoog

Roles Formal analysis, Investigation, Resources, Writing – review & editing

Affiliation Center for Comparative Medicine, University of California, Davis School of Medicine, Davis, California, United States of America

Luis Fernando Camarillo-Guerrero

Roles Formal analysis, Resources, Software, Writing – review & editing

Affiliation Host-Microbiota Interactions Laboratory, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom

Jessica A. Klein

Roles Formal analysis, Resources, Writing – review & editing

Affiliation Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America

Trevor D. Lawley

Roles Funding acquisition, Resources, Writing – review & editing

Affiliation Host-Microbiota Interactions Laboratory, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom

Jay V. Solnick

Roles Funding acquisition, Resources, Writing – review & editing

Affiliations Center for Comparative Medicine, University of California, Davis School of Medicine, Davis, California, United States of America, Department of Medicine, University of California, Davis School of Medicine, Davis, California, United States of America, Department of Microbiology and Immunology, University of California, Davis School of Medicine, Davis, California, United States of America

Tadashi Fukami

Roles Formal analysis, Funding acquisition, Resources, Software, Writing – review & editing

Affiliation Department of Biology, Stanford University, Stanford, California, United States of America

Manuel R. Amieva

Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

amieva@stanford.edu

Affiliations Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California, United States of America, Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America

Competing Interests

The authors have declared that no competing interests exist.