About the Authors

Isabel Ferreirós-Vidal

Roles Formal analysis, Investigation, Supervision, Visualization

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Thomas Carroll

Roles Data curation, Formal analysis

Current address: The Rockefeller University, New York, New York, United States of America

Affiliation MRC London Institute of Medical Sciences, London, United Kingdom

Tianyi Zhang

Roles Investigation, Writing – review & editing

Current address: Tri-Institutional Therapeutics Discovery Institute, New York, New York, United States of America

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Vincenzo Lagani

Roles Data curation, Formal analysis

Affiliations Gnosis Data Analysis, Heraklion, Greece, Institute of Chemical Biology, Ilia State University, Tbilisi, Georgia

Ricardo N. Ramirez

Roles Data curation, Formal analysis, Investigation

Current address: Harvard Medical School, Boston, Cambridge, Massachusetts, United States of America

Affiliation Department of Developmental and Cell Biology and Center for Complex Biological Systems, University of California, Irvine, California, United States of America

Elizabeth Ing-Simmons

Roles Formal analysis, Visualization

Current address: Regulatory Genomics Group, Max Planck Institute for Molecular Biomedicine, Münster, Germany

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom, Computational Regulatory Genomics, MRC London Institute of Medical Sciences, London, United Kingdom

Alicia G. Gómez-Valadés

Roles Investigation, Visualization

Current address: Neuronal Control of Metabolism Laboratory, Institut d′Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Lee Cooper

Roles Investigation

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Ziwei Liang

Roles Investigation

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Georgios Papoutsoglou

Roles Data curation, Formal analysis, Visualization

Affiliation Computer Science Department, University of Crete, Heraklion, Greece

Gopuraja Dharmalingam

Roles Data curation, Formal analysis, Visualization

Affiliation MRC London Institute of Medical Sciences, London, United Kingdom

Ya Guo

Roles Data curation, Formal analysis, Investigation

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Sonia Tarazona

Roles Formal analysis

Affiliations Genomics of Gene Expression Laboratory, Principe Felipe Research Center, Valencia, Spain, Department of Applied Statistics, Operations Research and Quality, Universitat Politècnica de València, Valencia, Spain

Sunjay J. Fernandes

Roles Formal analysis, Investigation

Affiliation Unit of Computational Medicine, Department of Medicine, Solna, Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden

Peri Noori

Roles Investigation

Affiliation Unit of Computational Medicine, Department of Medicine, Solna, Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden

Gilad Silberberg

Roles Formal analysis

Affiliation Unit of Computational Medicine, Department of Medicine, Solna, Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden

Amanda G. Fisher

Roles Conceptualization, Funding acquisition, Writing – review & editing

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

Ioannis Tsamardinos

Roles Conceptualization, Supervision

Affiliations Gnosis Data Analysis, Heraklion, Greece, Computer Science Department, University of Crete, Heraklion, Greece

Ali Mortazavi

Roles Conceptualization, Supervision

Affiliation Department of Developmental and Cell Biology and Center for Complex Biological Systems, University of California, Irvine, California, United States of America

Boris Lenhard

Roles Conceptualization, Formal analysis, Supervision

Affiliations Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom, Computational Regulatory Genomics, MRC London Institute of Medical Sciences, London, United Kingdom, Sars International Centre for Marine Molecular Biology, University of Bergen, Bergen, Norway

Ana Conesa

Roles Conceptualization, Data curation, Funding acquisition, Supervision, Writing – review & editing

matthias.merkenschlager@lms.mrc.ac.uk (MM); jesper.tegner@kaust.edu.sa (JT); aconesa@ufl.edu (AC)

Affiliation Microbiology and Cell Science Department, IFAS, University of Florida, Gainesville, Florida, United States of America

Jesper Tegner

Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

matthias.merkenschlager@lms.mrc.ac.uk (MM); jesper.tegner@kaust.edu.sa (JT); aconesa@ufl.edu (AC)

Affiliations Unit of Computational Medicine, Department of Medicine, Solna, Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden, Science for Life Laboratory, Solna, Sweden, Biological and Environmental Sciences and Engineering Division, Computer, Electrical and Mathematical Sciences and Engineering Division, King Abdullah University of Science and Technology, Saudi Arabia

Matthias Merkenschlager

Roles Conceptualization, Formal analysis, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

matthias.merkenschlager@lms.mrc.ac.uk (MM); jesper.tegner@kaust.edu.sa (JT); aconesa@ufl.edu (AC)

Affiliations Lymphocyte Development Group, MRC London Institute of Medical Sciences, London, United Kingdom, Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London, United Kingdom

David Gomez-Cabrero

Roles Data curation, Formal analysis, Investigation, Methodology, Writing – review & editing

Affiliations Unit of Computational Medicine, Department of Medicine, Solna, Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden, Science for Life Laboratory, Solna, Sweden, Centre for Host Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King’s College London, London, United Kingdom, Navarrabiomed, Complejo Hospitalario de Navarra (CHN), Universidad Pública de Navarra (UPNA), IdiSNA, Pamplona, Spain

Competing Interests

The authors have declared that no competing interests exist.