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RNA structure

Two-step mixed model approach to analyzing differential alternative RNA splicing

Li Luo, Huining Kang, Xichen Li, Scott A. Ness, Christine A. Stidley

published 09 Oct 2020

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RNAthor – fast, accurate normalization, visualization and statistical analysis of RNA probing data resolved by capillary electrophoresis

Julita Gumna, Tomasz Zok, Kacper Figurski, Katarzyna Pachulska-Wieczorek, Marta Szachniuk

published 01 Oct 2020

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K⁺ promotes the favorable effect of polyamine on gene expression better than Na⁺

Takashi Nishio, Kaito Sugino, Yuko Yoshikawa, Michiaki Matsumoto, Yohei Oe, Koichiro Sadakane, Kenichi Yoshikawa

published 03 Sep 2020

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Multi-agent approach to sequence structure simulation in the RNA World hypothesis

Jaroslaw Synak, Agnieszka Rybarczyk, Jacek Blazewicz

published 28 Aug 2020

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Comparative analyses of alphaviral RNA:Protein complexes reveals conserved host-pathogen interactions

Natasha N. Gebhart, Richard W. Hardy, Kevin J. Sokoloski

published 25 Aug 2020

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Weighted-persistent-homology-based machine learning for RNA flexibility analysis

Chi Seng Pun, Brandon Yung Sin Yong, Kelin Xia

published 21 Aug 2020

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Testing reference genes for transcript profiling in Uromyces appendiculatus during urediospore infection of common bean

Tobias I. Link

published 06 Aug 2020

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Unraveling the molecular pathobiology of vocal fold systemic dehydration using an in vivo rabbit model

Naila Cannes do Nascimento, Andrea P. dos Santos, M. Preeti Sivasankar, Abigail Cox

published 31 Jul 2020

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Sensitivity of yeast to lithium chloride connects the activity of YTA6 and YPR096C to translation of structured mRNAs

Maryam Hajikarimlou, Houman Moteshareie, Katayoun Omidi, Mohsen Hooshyar, Sarah Shaikho, Tom Kazmirchuk, Daniel Burnside, Sarah Takallou, Narges Zare, Sasi Kumar Jagadeesan, Nathalie Puchacz, Mohan Babu, Myron Smith, Martin Holcik, Bahram Samanfar, Ashkan Golshani

published 08 Jul 2020

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Refining LNA safety profile by controlling phosphorothioate stereochemistry

Erik Daa Funder, Nanna Albæk, Annie Moisan, Sabine Sewing, Troels Koch

published 12 Jun 2020

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RefShannon: A genome-guided transcriptome assembler using sparse flow decomposition

Shunfu Mao, Lior Pachter, David Tse, Sreeram Kannan

published 02 Jun 2020

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The crystal structures of Thermus thermophilus CMP kinase complexed with a phosphoryl group acceptor and donor

Ryosuke Mega, Noriko Nakagawa, Seiki Kuramitsu, Ryoji Masui

published 29 May 2020

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The L motifs of two moss pentatricopeptide repeat proteins are involved in RNA editing but predominantly not in RNA recognition

Takuya Matsuda, Mamoru Sugita, Mizuho Ichinose

published 29 Apr 2020

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