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RNA structure

Generalized linear models provide a measure of virulence for specific mutations in SARS-CoV-2 strains

Anastasis Oulas, Maria Zanti, [ ... ], George M. Spyrou

PFRED: A computational platform for siRNA and antisense oligonucleotides design

Simone Sciabola, Hualin Xi, [ ... ], Robert V. Stanton

rfaRm: An R client-side interface to facilitate the analysis of the Rfam database of RNA families

Lara Sellés Vidal, Rafael Ayala, Guy-Bart Stan, Rodrigo Ledesma-Amaro

miRNA expression profiling and zeatin dynamic changes in a new model system of in vivo indirect regeneration of tomato

Huiying Cao, Xinyue Zhang, [ ... ], Bing Jia

Requirements for efficient ligand-gated co-transcriptional switching in designed variants of the B. subtilis pbuE adenine-responsive riboswitch in E. coli

Lea K. Drogalis, Robert T. Batey

Unraveling the mechanism of recognition of the 3’ splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60

Hsin-hao T. Hsiao, Gregg V. Crichlow, [ ... ], Demetrios T. Braddock

RNA-hydrolyzing activity of metallo-β-lactamase IMP-1

Yoshiki Kato, Masayuki Takahashi, [ ... ], Akiko Shimizu-Ibuka

Two-step mixed model approach to analyzing differential alternative RNA splicing

Li Luo, Huining Kang, [ ... ], Christine A. Stidley

RNAthor – fast, accurate normalization, visualization and statistical analysis of RNA probing data resolved by capillary electrophoresis

Julita Gumna, Tomasz Zok, [ ... ], Marta Szachniuk

K⁺ promotes the favorable effect of polyamine on gene expression better than Na⁺

Takashi Nishio, Kaito Sugino, [ ... ], Kenichi Yoshikawa

Multi-agent approach to sequence structure simulation in the RNA World hypothesis

Jaroslaw Synak, Agnieszka Rybarczyk, Jacek Blazewicz

Comparative analyses of alphaviral RNA:Protein complexes reveals conserved host-pathogen interactions

Natasha N. Gebhart, Richard W. Hardy, Kevin J. Sokoloski

Weighted-persistent-homology-based machine learning for RNA flexibility analysis

Chi Seng Pun, Brandon Yung Sin Yong, Kelin Xia

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