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Protein structure

Preference of Small Molecules for Local Minimum Conformations when Binding to Proteins

Qi Wang, Yuan-Ping Pang

A Framework for Exploring Functional Variability in Olfactory Receptor Genes

Orna Man, David C. Willhite, [ ... ], Yoav Gilad

HIV-Specific Probabilistic Models of Protein Evolution

David C. Nickle, Laura Heath, [ ... ], Sergei L. Kosakovsky Pond

The Stability and Formation of Native Proteins from Unfolded Monomers Is Increased through Interactions with Unrelated Proteins

Claudia Rodríguez-Almazán, Francisco J. Torner, [ ... ], Armando Gómez Puyou

Structural Insights into the Evolution of a Non-Biological Protein: Importance of Surface Residues in Protein Fold Optimization

Matthew D. Smith, Matthew A. Rosenow, [ ... ], John C. Chaput

Calculation of the Free Energy and Cooperativity of Protein Folding

Alex Kentsis, Tatyana Gindin, Mihaly Mezei, Roman Osman

Combinatorial Computational Approaches to Identify Tetracycline Derivatives as Flavivirus Inhibitors

Jinn-Moon Yang, Yan-Fu Chen, [ ... ], Yun-Liang Yang

Efficient Identification of Critical Residues Based Only on Protein Structure by Network Analysis

Michael P. Cusack, Boris Thibert, Dale E. Bredesen, Gabriel del Rio

Phage Lambda CIII: A Protease Inhibitor Regulating the Lysis-Lysogeny Decision

Oren Kobiler, Assaf Rokney, Amos B. Oppenheim

Analysis of In-Vivo LacR-Mediated Gene Repression Based on the Mechanics of DNA Looping

Yongli Zhang, Abbye E. McEwen, Donald M. Crothers, Stephen D. Levene

Towards Alignment Independent Quantitative Assessment of Homology Detection

Avihay Apatoff, Eddo Kim, Yossef Kliger

The Interplay between PolyQ and Protein Context Delays Aggregation by Forming a Reservoir of Protofibrils

Donatella Bulone, Laura Masino, [ ... ], Annalisa Pastore

Clues to Neuro-Degeneration in Niemann-Pick Type C Disease from Global Gene Expression Profiling

Jonathan V. Reddy, Ian G. Ganley, Suzanne R. Pfeffer

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