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Macromolecular structure analysis

DMS-informed secondary structure modeling of Epstein–Barr Virus LMP-1 pre-mRNA defines novel elements spanning introns

Taylor O. Eich, Evelyn C. Coppenbarger, Abdelraouf O. Dapour, Walter N. Moss

Design and evaluation of a novel fusion antigen for diagnosing human strongyloidiasis: An immunoinformatics approach

Marzieh Asadi, Sina Taghvimi, [ ... ], Amir Savardashtaki

Enhanced IGFL1 translation in response to IL-1β is controlled by distinct 3’UTR elements

Giulia Cardamone, Melanie Flohr, [ ... ], Tobias Schmid

Pan-genome and reverse vaccinology for a multi-epitope vaccine against circulating post-2022 Monkeypox virus strains

Md Al Saber, Md. Hasan Jafre Shovon, [ ... ], Md Nazmul Hasan

GARN3: A coarse-grained helix centered technique for RNA 3D structures prediction

Jhonatan Silva, Johanne Cohen, Daniel Cordeiro

Prediction of pre- and postfusion conformations of class I fusion proteins with AlphaFold2

Sevilay Gülesen, Victoria Most, Clara T. Schoeder, Jens Meiler

Structural bioinformatic studies of eight integral transmembrane NADPH oxidases and their AlphaFold 3 predicted QTY analogs with reduced hydrophobicity

Tutu Hu, Rick Cheng, Edward Chen, Shuguang Zhang

Predicting unknown binding sites for transition-metal-based compounds in proteins

Andrea Levy, Ursula Rothlisberger

Large-scale statistical dissection of sequence-derived biochemical features distinguishing soluble and insoluble proteins

Nguyen Huy Hoang Vu, Bao Long Nguyen

Solution structure of mouse HBS1L/SKI7-specific UBA domain in complex with ubiquitin: Implications for stalled ribosome recognition

Nobukazu Nameki, Fahu He, [ ... ], Kanako Kuwasako

Comparative unfolding of the Trp-cage miniprotein in anionic and cationic surfactants

Osita Sunday Nnyigide, Haewon Byeon, Uchenna Esther Okpete

In silico pharmacological analysis of Tinospora cordifolia compounds targeting African swine fever virus B175L

Kasuni Karunarathne, Saumya Poorni, [ ... ], Lakmal Ranathunga

A Lipoxygenase 3 mutation reverses growth phenotypes in an Arabidopsis Plastid Lipase 3 overexpression line

Yosia Mugume, Ron Cook, [ ... ], Christoph Benning

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