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Genome sequencing

Filling the gaps in Australian angiosperm genomes

Theodore R. Allnutt, Todd G. B. McLay, [ ... ], David J. Cantrill

Recurrent enhancer-promoter interactions across samples

Matthew Weston, Satvik Gunjala, Haiyan Hu, Xiaoman Li

The NBGENS project protocol: Pilot study for genetic newborn screening in Galicia

Lluis Lis-López, Catalina López-López, [ ... ], María Luz Couce

Correlation assessment of SARS-CoV-2 variants and their subvariants present in clinical and wastewater samples in Oregon, USA (February 7, 2021 - February 26, 2022) using the Freyja bioinformatics approach

Anirudh Bhatia, Justin Elser, [ ... ], Tyler S. Radniecki

Methods for cost-efficient, whole genome sequencing surveillance for enhanced detection of outbreaks in a hospital setting

Kady D. Waggle, Marissa Pacey Griffith, [ ... ], Lora Lee Pless

Herpes simplex virus detection and genomes from under-sampled, remote populations

Christopher D. Bowen, Alexandre Blake, [ ... ], Nita Bharti

Genome misassembly detection using Stash: A data structure based on stochastic tile hashing

Armaghan Sarvar, Lauren Coombe, Inanc Birol

Whole-genome sequencing reveals a previously unrecognized measles virus cluster in Burundi

Néhémie Nzoyikorera, David F. Nieuwenhuijse, [ ... ], Bas B. Oude Munnink

Potentials and challenges of next generation sequencing-guided individualized treatment for management of rifampicin-resistant tuberculosis – A qualitative study

Tu Pham Hien Trang, Antonio Barrenechea-Pulache, [ ... ], Annelies Van Rie

Detection of Coxsackievirus A24v during an acute haemorrhagic conjunctivitis outbreak in Dar es Salaam, Tanzania, January-February 2024

Lawrence A. Mapunda, Peter van Heusden, [ ... ], Nyambura Moremi

Regional VRE surveillance using routine centralised, multicentre whole genome sequencing

Djamayl L. H. H. Engelen, Jean-Luc Murk, [ ... ], Joep J. J. M. Stohr

Sequencing complete plasmids on Oxford Nanopore Technologies sequencers using R2C2 and Chopper

Kayla D. Schimke, Christopher Vollmers

In vitro culture of human-infecting Encephalitozoon spp. for genome sequencing with minimal host contaminant

Anne Caroline Mascarenhas dos Santos, Pingdong Liang, [ ... ], Karina Tuz

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